Protein

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Genbank accession
YP_002003351.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANKISTVRTYPLNGSVNFTITFEYLARKFVQVTLIGKDRKELVLNQDYRFTAKTQITTARAWTAADGYEMIEIRRFTSATDRLVDFADGSILRAYDLNISQIQTIHVAEEARDLTADTIGVNNDGNLDARGRKIVNLAFATSDYDAVPLKQITDRESSVWNAVTKASEQADRSNKEANRSRDEADRAKREADRSTQQAGVSATQAVEAKKQADRSNSEANRSKGYADSMTASVEAAKGHAESASKEANRSRAEANRAADEVTKAAAEVSKAAAHVASAKSQADRSNTEANRAKSEADRAKTEADKLGNINEFAGTLEKVEGVTPTFKSGIKLRSGDFYAESGSFTKKTQGGDWSQWTGALTPDVQHDIEGQGNIAYLLERATTLSKEPLYAKCLYNNGVGENFFIRQYLRDAHFDLRSDGALISSSGWSIPADGNLYIKKYGSNLDTWVNKRLTAHAYSKGEVNKMVDGLLTTEQGDARYARKSSGWAEVWQGSAGGGVSVSLSQDVRWRTIWILAHGGMCSVQIGDDDTYFVVAMAGWLKFTISNNGRTFRNDQDRNTVPEQILVQN
Physico‐chemical
properties
protein length:569 AA
molecular weight: 62514,35900 Da
isoelectric point:7,08023
aromaticity:0,07909
hydropathy:-0,60896

Domains

Domains [InterPro]
IPR005604
ATT
1–130
IPR005604 Coil Coil Coil G3DSA:2.60.320.30
DC_0264
STR
1–568
DC_0264
YP_002003351.1
1 569
Architecture
ATT
STR
ATT 1-130 | STR 131-568 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage Yepe2
[NCBI] 		532078 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Berlinvirus
Host Yersinia pestis A1122
[NCBI] 		1035377 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Yersiniaceae > Yersinia > Yersinia pestis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_002003351.1 [NCBI]
Genbank nucleotide accession
NC_011038.1 [NCBI]
CDS location
range 32015 -> 33724
strand +
CDS
ATGGCTAACAAAATTTCCACTGTACGTACTTACCCGCTGAATGGTTCCGTGAACTTCACGATTACCTTTGAGTATCTAGCACGTAAGTTCGTCCAAGTGACACTTATAGGGAAAGACCGTAAGGAGTTGGTTCTTAATCAGGACTACCGCTTTACCGCTAAGACCCAAATCACAACCGCCCGTGCATGGACTGCTGCGGATGGCTATGAGATGATTGAGATTCGTCGATTCACTTCTGCAACCGACCGTCTGGTTGACTTTGCTGATGGCTCAATCCTTCGCGCATATGACCTTAACATCTCACAGATTCAGACGATACACGTAGCTGAGGAGGCACGAGACCTTACTGCGGATACTATTGGTGTCAACAATGATGGTAACCTAGATGCTCGTGGTCGTAAGATTGTGAACTTAGCGTTTGCTACTAGTGACTATGATGCTGTCCCTCTGAAGCAGATTACAGACCGTGAGTCCTCTGTGTGGAACGCTGTGACCAAAGCTAGTGAACAAGCTGACCGGTCTAACAAGGAAGCCAATCGCTCACGGGACGAAGCTGACCGCGCTAAACGTGAAGCTGACCGCTCGACCCAACAGGCAGGTGTCTCTGCGACACAAGCAGTTGAGGCCAAGAAGCAAGCTGACCGTTCCAACTCTGAGGCCAACCGCTCTAAAGGTTATGCTGATAGTATGACAGCCAGTGTTGAAGCTGCTAAGGGTCACGCTGAGAGTGCCAGTAAGGAAGCTAATCGTTCCCGTGCTGAGGCTAATCGTGCTGCTGATGAAGTTACTAAGGCCGCTGCTGAGGTTTCCAAAGCTGCTGCACATGTGGCTAGCGCTAAGAGTCAGGCTGACCGTTCCAACACTGAGGCTAATCGTGCTAAGAGTGAAGCAGACCGTGCTAAGACTGAGGCCGATAAGTTAGGCAATATTAATGAGTTCGCTGGAACTCTCGAGAAGGTGGAAGGAGTAACACCAACTTTCAAATCGGGGATTAAACTTCGTTCTGGTGACTTCTATGCCGAGAGCGGTAGCTTCACTAAGAAAACACAGGGTGGCGATTGGAGCCAGTGGACTGGAGCTCTGACACCAGATGTGCAACATGATATAGAAGGACAAGGGAACATCGCGTATCTCCTTGAGCGAGCTACAACTTTGAGTAAAGAGCCCCTATATGCTAAGTGCCTATATAACAATGGTGTTGGCGAAAACTTCTTTATCAGGCAGTATCTTCGAGATGCGCATTTTGACTTACGCTCCGATGGTGCTCTTATCAGCTCTTCTGGTTGGAGTATCCCAGCCGATGGTAACTTATACATCAAGAAGTATGGATCGAATCTTGATACATGGGTTAATAAGCGCCTAACCGCGCACGCCTACAGCAAGGGTGAAGTTAACAAGATGGTTGATGGACTTCTTACTACCGAACAAGGTGATGCTCGTTATGCGCGCAAGAGCTCTGGTTGGGCCGAGGTATGGCAAGGCTCTGCTGGTGGTGGTGTTTCAGTAAGCCTCTCACAGGATGTCCGCTGGAGAACTATCTGGATTCTAGCTCATGGTGGCATGTGTTCTGTTCAGATTGGCGATGATGATACTTACTTCGTGGTGGCTATGGCTGGTTGGTTGAAGTTCACAATTTCCAACAACGGGAGAACTTTCCGTAACGACCAAGATCGAAATACAGTACCTGAGCAAATCTTAGTTCAAAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f48fac3ae786f3fb38b3fee0e1ac105ab43dc6a80cd288c0463e3d4deed67f40
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7133
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic sequences and analysis of several T7-like bacteriophages Savalia,D., Severinov,K. and Molineux,I. 2013-02-01 — GenBank