Protein

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Genbank accession
ABN47331.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,69
Protein sequence
MALVIHYTRNEDGTFDVKRYRDNPMNFVVNHVPDGVPVRVFIDEIGEDNDVTEDFEALKENATFHIVESAGGGAIKGVMKIFSVILKPLAKLLSPSVKGASSNLANSQADSPNNSLTDRNNKARPYERSYDICGTVQTIPNNLMSTYKVFNAAGKIVEYGYYDAGRGYLDIHPEGITDGDTRVSDITGTSVAVYAPYTSPNNTSTPQVMIGDPIEQGLYITVESNEVDGVVLKAPNGLGISFSYMSGYPSLSGNIGTIYDPTGWFGFFWGTGA
Physico‐chemical
properties
protein length:273 AA
molecular weight: 29593,64510 Da
isoelectric point:4,70118
aromaticity:0,10256
hydropathy:-0,24029

Domains

Domains [InterPro]
DC_0118
STR
1–264
DC_0118
ABN47331.1
1 273
Architecture
STR
STR 1-264 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ABN47331.1
1 273
Domain Start End Length (AA) Confidence
N-terminal 1 227 227 0,9821
Central domain 228 262 36 0,9608
C-terminal 263 273 10 0,1489
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-227
Central
228-262
C-terminal
263-273

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SETP3
[NCBI] 		424944 Uroviricota > Caudoviricetes > Sarkviridae > Jerseyvirus > Jerseyvirus SETP3
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABN47331.1 [NCBI]
Genbank nucleotide accession
EF177456 [NCBI]
CDS location
range 19825 -> 20646
strand +
CDS
TTGGCGCTAGTAATCCACTATACCCGTAACGAAGACGGCACATTTGACGTTAAACGTTATCGCGATAATCCGATGAACTTCGTCGTGAACCACGTTCCCGATGGGGTGCCGGTTCGCGTTTTCATCGACGAAATTGGAGAAGATAACGATGTAACAGAAGACTTCGAAGCACTGAAAGAAAACGCGACTTTCCACATTGTGGAATCCGCGGGTGGTGGCGCTATCAAAGGCGTCATGAAGATTTTTAGCGTTATCCTTAAACCGCTGGCGAAACTACTATCACCATCCGTGAAAGGGGCGTCCTCTAACCTGGCGAACTCGCAGGCGGATTCCCCGAACAACAGTCTCACCGACCGTAACAACAAGGCGCGCCCGTACGAACGCAGTTACGACATCTGCGGAACGGTGCAAACCATCCCCAATAACCTTATGTCTACTTACAAGGTGTTTAACGCCGCCGGTAAAATTGTAGAGTACGGCTATTACGACGCCGGGCGGGGGTATCTCGACATACACCCTGAAGGTATAACTGACGGGGACACCCGCGTATCAGACATAACAGGCACGTCGGTTGCCGTGTACGCACCATATACATCGCCGAATAACACATCTACACCCCAGGTCATGATCGGGGACCCCATAGAGCAAGGCCTATACATTACCGTAGAATCTAACGAAGTTGACGGCGTGGTTCTTAAAGCACCGAACGGTCTGGGCATTTCTTTCTCTTACATGTCCGGGTATCCGTCTTTGTCCGGAAACATTGGCACGATATATGACCCAACAGGGTGGTTCGGATTTTTCTGGGGTACTGGTGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e9b795021299adc0f9d0529986063adb304b767f1bf9429f15ad088d6fddf838
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5927
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of Salmonella Enteritidis Typing Phage 3 (SETP3) De Lappe,N. and Cormican,M. 2009-01-01 — GenBank