Protein

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Genbank accession
YP_010298950.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MNYYYIDSSATVNGVGTKGNPFNSIQSAIDANLTHPLTLYLKAGQTYELAYYNRTTASFFNNKTGVQSVITRYGTGAKPILTSNNDTIIIDAYACQIKFENIRISPKPGSERTAIYLNLIPIGDSANNNICNLTLNKVDFIGTPESIGGMNGINRVFCLNSLVDYAGLSNIAHKLLISNCTFDNVNAGVQLRGNPDLSDKTTYHGDQKKSYGFRVINCSFTNIINSAVFIGWAASKNQSRDVIGDDMATGVDGLYYSSYRYNVYNTSTGASQADVPVWFSGTRYLTLQNFEIHGAGPAYPDRQTIDFDYHCHYCVARYGYTSNNARGSMIIQGPFSNSWYSSKGYTPLSNDAYTLYYTLGFGSIGNVIEYVISFNDGVGRTTSTADKYWQKTSAFRYVYDNVVRNCVFIDTVTTANDNVIAINPQTDDSLTALSLTLDSNIFYYANKTATELVTPASMTNFPTMMSKFKLKNNIFFSEKWAGATPTSTGLIEEGNLFTNPAFLQGLSNSSFAGLKEALLAIKLKMTSPCIGSGSSNNNPDFIGKVGNNIGSIQ
Physico‐chemical
properties
protein length:553 AA
molecular weight: 60584,04790 Da
isoelectric point:6,97189
aromaticity:0,12116
hydropathy:-0,20470

Domains

Domains [InterPro]
DC_1961
STR
1–553
DC_1961
IPR011050
STR
3–259
IPR011050
YP_010298950.1
1 553
Architecture
STR
STR 1-553
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010298950.1
1 553
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,6833
Central domain 11 515 506 0,9916
C-terminal 516 553 37 0,7245
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-515
C-terminal
516-553

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpM_FBKp24
[NCBI] 		2801834 Uroviricota > Caudoviricetes > Chimalliviridae > Maaswegvirus Kp24 >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010298950.1 [NCBI]
Genbank nucleotide accession
NC_061421 [NCBI]
CDS location
range 237880 -> 239541
strand +
CDS
ATGAACTATTATTACATTGATTCTTCCGCTACAGTTAACGGCGTTGGGACAAAAGGTAACCCCTTTAATTCGATTCAGTCAGCCATTGACGCCAACTTAACTCATCCTCTAACACTATACCTTAAAGCAGGTCAAACCTACGAACTAGCGTATTATAATCGTACCACTGCCAGTTTCTTTAACAATAAAACAGGCGTCCAGTCCGTCATTACTCGATACGGTACTGGTGCCAAGCCAATTCTCACCAGTAATAACGATACAATTATCATTGATGCGTACGCGTGCCAGATAAAATTTGAGAATATTCGCATTTCCCCAAAACCAGGGTCAGAAAGAACCGCCATCTATCTTAACCTGATCCCGATAGGCGATAGTGCCAATAACAACATTTGTAACTTAACGCTAAACAAGGTTGATTTTATTGGCACCCCTGAATCAATAGGGGGGATGAACGGGATTAACCGCGTGTTCTGTTTAAACAGTTTGGTCGATTATGCCGGTCTCAGTAATATTGCGCATAAACTCTTAATCAGTAACTGTACATTTGACAACGTTAACGCTGGCGTTCAGTTGAGAGGTAACCCTGATCTCTCAGACAAAACGACCTATCACGGTGACCAGAAGAAAAGTTATGGTTTTAGAGTGATTAATTGCTCGTTTACGAATATCATTAACTCGGCGGTGTTCATCGGGTGGGCGGCAAGTAAAAATCAATCGAGAGATGTCATTGGTGATGATATGGCGACAGGTGTAGACGGTTTGTACTATTCCAGTTACCGTTACAACGTCTACAATACATCAACGGGTGCGTCTCAAGCAGACGTCCCAGTCTGGTTCTCTGGAACGCGTTATCTGACATTACAGAATTTCGAAATTCATGGCGCCGGCCCGGCTTACCCCGACCGTCAAACCATTGACTTTGATTATCATTGTCACTATTGCGTGGCGCGTTACGGGTACACCTCAAACAACGCACGTGGTTCAATGATTATCCAAGGACCTTTCAGTAACAGCTGGTACAGTTCTAAAGGATACACACCATTGTCCAATGATGCGTATACTTTGTACTATACGCTTGGTTTTGGGTCGATTGGCAACGTCATTGAATACGTTATTTCTTTCAACGACGGGGTAGGGAGAACGACCAGTACTGCTGATAAATATTGGCAGAAAACTTCTGCGTTCCGATACGTTTATGATAACGTAGTGCGTAACTGTGTCTTTATTGATACCGTGACCACGGCGAACGATAACGTGATTGCCATTAACCCACAGACAGACGACAGTTTAACTGCGCTGAGCCTGACTTTGGACAGTAACATTTTCTACTATGCTAACAAGACCGCCACGGAATTAGTCACTCCTGCTTCGATGACTAACTTCCCGACCATGATGTCTAAATTCAAATTGAAAAATAATATTTTCTTTTCTGAAAAATGGGCAGGTGCAACGCCGACTTCAACGGGACTGATCGAAGAAGGGAATCTCTTTACTAACCCTGCTTTTTTACAAGGGTTGTCGAACAGTTCTTTTGCGGGCTTGAAAGAAGCGTTGTTGGCTATCAAATTGAAAATGACTAGTCCTTGTATTGGGAGTGGCTCATCAAACAATAACCCAGACTTTATCGGTAAAGTTGGGAACAACATCGGATCAATTCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3e5bf1c64f1e5144aa9c6bf01c5447449444f2a7c76db78c5bc4860fe73ce45f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6481
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of four novel bacteriophages infecting Klebsiella pneumoniae Estrada Bonilla,B., Costa,A.R., van Rossum,T., Hagedoorn,S., Wallinga,H., Xiao,M., Song,W., Haas,P.-J., Nobrega,F.L. and Brouns,S.J.J. 2021-03-02 — GenBank