Protein

View in Explore
Genbank accession
USR82273.1 [GenBank]
Protein name
putative BppU family baseplate upper protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MDFTRRENYKLMSNLEKSVAINLENTAHYENISNLDITFRTGESDSSVLLFNIIKNNQPLLLSEENIKARIAIRGKGVMVVAPLEILDPFKGILKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTITFNVEKSLFSKVPSETKLHYIVEFQELEKTIMDRAKAMDEAIKNGEDYASLIEKAKEKGLSDIQIAKSSSIDELKQLANSRISDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVTSGSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGDSTQFIYVSQAINYPRGASTNGTVEYLVVTSDYKRMTYRPNGTNKVFVKRKEVGSWSDWSELALNDYNTPFETVQNAQSKANTAESNAKLYTDDKFNKRYSVIFDGTANDVGSTLYLNESLDQFILLIFYGTFPGGDFTEFGNPFGGGKISLNPSNLPDNDGDGGGVYEFGLTKSSRTSLTISNDVYFDLGSRRGSGANANRGTINKIIGVRK
Physico‐chemical
properties
protein length:499 AA
molecular weight: 55692,62080 Da
isoelectric point:5,62111
aromaticity:0,09419
hydropathy:-0,52305

Domains

Domains [InterPro]
G3DSA:2.60.40.3350
ATT
17–141
G3DSA:2.60.40.3350 DC_0143 cd19958 DC_0151
IPR018913
ATT
17–163
IPR018913 Coil cd19958 Coil
USR82273.1
1 499
Architecture
ATT
STR
STR
RBD
ATT 17-163 | STR 164-269 | STR 290-349 | RBD 350-499
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage Rih21
[NCBI] 		2910753 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USR82273.1 [NCBI]
Genbank nucleotide accession
OL840290 [NCBI]
CDS location
range 24024 -> 25523
strand -
CDS
ATGGACTTTACACGAAGGGAGAATTATAAGTTAATGAGTAATTTAGAGAAATCTGTAGCTATAAATTTAGAAAACACAGCGCATTATGAAAATATTTCAAATCTAGATATAACTTTTAGAACAGGAGAGAGTGATTCTTCTGTTCTTCTTTTTAATATCATTAAAAATAATCAACCGTTATTACTGAGTGAAGAAAATATCAAAGCACGAATAGCGATTCGAGGTAAAGGAGTAATGGTAGTTGCTCCACTAGAAATATTAGATCCATTTAAAGGTATTTTAAAATTTCAATTACCTAATGATGTAATTAAAAGAGATGGAAGTTATCAAGCTCAAGTTTCGGTTGCAGAATTAGGTAATTCAGACGTGGTAGTTGTAGAGAGAACTATCACATTTAACGTTGAAAAAAGTTTGTTTAGCAAGGTTCCCTCTGAAACAAAACTACACTATATTGTTGAGTTTCAAGAATTAGAAAAAACTATTATGGATCGCGCGAAAGCAATGGACGAGGCTATAAAAAATGGTGAGGATTATGCGAGTCTGATTGAAAAAGCTAAAGAAAAAGGTCTATCAGATATTCAAATAGCAAAATCTTCAAGTATTGATGAATTAAAGCAACTTGCTAATAGCCGTATATCTGATTTGGAAAATAAAGCGCAAGCATATTCAAGAACATTCGATGAGCAAAAGCGATATATGGATGAGAAACATGAAGCCTTCAAGCAGTCAGTGAATAGTGGTGGTTTAGTCACAAGTGGCTCAACTTCAAATTGGCAAAAAGCTAAGATTACTAAAGATGATGGTAAGATAATGCAGATTACTGGATTTGATTTTAATAATCCAGAACAAAGAATAGGCGATTCAACCCAATTTATTTATGTTTCGCAAGCTATAAATTATCCAAGAGGCGCAAGCACTAATGGTACTGTCGAATATTTAGTAGTAACTTCCGACTACAAACGTATGACATATCGTCCAAATGGTACAAATAAAGTATTTGTTAAGAGAAAAGAAGTGGGTTCGTGGTCTGATTGGTCAGAATTAGCGCTTAATGATTACAACACACCTTTTGAAACTGTTCAAAACGCGCAATCAAAGGCTAACACGGCTGAAAGCAATGCCAAACTATACACAGATGACAAGTTTAATAAAAGATATTCAGTTATTTTTGATGGGACGGCAAATGACGTTGGCTCAACATTATATCTTAATGAAAGTTTAGATCAATTTATTTTGTTAATTTTTTATGGAACTTTTCCAGGTGGAGATTTTACTGAGTTTGGCAACCCCTTTGGTGGCGGAAAAATTTCATTGAACCCATCAAATTTACCGGATAATGACGGTGACGGTGGAGGCGTTTATGAGTTTGGATTAACTAAATCTAGTCGTACATCATTAACTATATCAAACGATGTTTATTTTGACTTAGGAAGTCGAAGAGGTTCTGGTGCAAATGCAAATAGAGGAACAATCAACAAAATTATAGGAGTGAGAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8fb482c0696bea830df33d93d7f45c4b14d2edf61d9a7762d4b1497e93e95ef0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8054
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50