Protein

View in Explore
Genbank accession
XXJ62756.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TF
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MAELRSTTAIGGNIVWHGGNLRFDPQGETVLYNGYKLYTENDKPDPHTDLTEAVVKLAGDTMSGDLTIYKSSAQLHLSSFANTDASLYLTEDNGNHGVRYHYDGTVNQWQLIRRESGVENVVMYGSRSNNNIVVNGIGYLNTTQRIFADNYHPNADKWTTARTLTLAGEVTGSVSIDGTSNVTINAVLPNHTTFEEVGISASNSNYRATGKTDNGSDTTSDLDALNQAGTYYKLVGSTAINLPPNGTGYWYLQNYTYGTSGNLTQLAIPYGTSAGNGTISFRTRYSGVWDDWSTLYHTEFHPEADKWTTARTLTLSGDVTGSVSIDGSSNVTLTTVVGNDSHTHDGRYYTETESDARFVNVTGDAMTGFLTLPNTNANATNIIYGFGGTSNGLRGSMQYTSGDVSDITRSGFIDVGTSVTGRPAGETGWLWGVHAEHNNANGYSMNLAVGQNTQRLWWQSTIATTAGDWVAVFDDEYHPNADKWTTARTLSIGNTGKLVDGSSDVSWSLADIGALALTGGVLSGDTTLALGTKLYIGGGNTSYLSDGGTQHTPTLSGSGNVLIHANNDNNGTTEYVQIHAGSDTVGLRVSTNDITFKGNTVWHLGNDGAGSGLDADKLDGLQASQFLRSDAASTINGPLTVRHTNVQLNLMDSTYSDNYWQLDHQNGVLSFRYNGLDADFALNENGTAVFGHTVTAPTFSGALSGNASSATKLLTSRTLTIGNTAKSFNGTANVSWSPEELTGAEGDANISFGSGQSVTTAEFLSLLNTKGAFSTQYWVCRGSWSYAAQVVVDTGVGKFGTAGSVIEVIGKSQTGCTIRVTTATTSSGGGNTRREFIYIDNGSTYSPGWRTGYSNHYHPNADTWTTARTLTLAGDLSGSVSINGGSNVTLTAAVANDSHTHDTQYVKTSGSSTITNGTLNADGAAFSVSKDGRQSLSQIRNDITGISGYWHRFRSSGSGVSGWLFSSFDTPVARISTGGWYYGSGAILNELKLGGEVVLNESTDRADLLMIKSSTSSWGGLQISNSANEGIWSFMTDGATCGIYDDQNGDWVVQMTENAGVRLYYNSANRIETTSAGVTVTGALTASGNVTAYSDSRLKTNVEKIVNPLDKIDELNGYTYDRTDIEERQTGVIAQEVLKVLPEAVIEDDDGMYSVAYGNMVGLLIEGIKEEKRKREALEERLARLESLLS
Physico‐chemical
properties
protein length:1190 AA
molecular weight: 127040,13900 Da
isoelectric point:4,87948
aromaticity:0,08824
hydropathy:-0,35815

Domains

Domains [InterPro]
DC_1903
ATT
1–287
DC_1903 DC_0806 IPR030392 Coil
IPR005601
STR
58–186
IPR005601 cd19958 DC_1451
DC_1903
ATT
245–429
DC_1903 IPR030392
XXJ62756.1
1 1190
Architecture
ATT
STR
ATT 1-429 | STR 432-1189 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage CZ01
[NCBI] 		3435809 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXJ62756.1 [NCBI]
Genbank nucleotide accession
PV740454 [NCBI]
CDS location
range 82024 -> 85596
strand -
CDS
ATGGCAGAATTACGCTCAACAACCGCAATTGGCGGTAATATAGTATGGCACGGAGGTAATTTACGTTTCGATCCACAAGGCGAAACTGTACTTTACAACGGGTACAAGCTATACACAGAAAACGACAAGCCAGATCCCCACACAGACTTGACAGAAGCAGTTGTAAAACTTGCTGGTGATACGATGAGCGGTGATTTGACGATTTATAAATCATCAGCACAATTGCATTTAAGCAGCTTTGCGAACACAGATGCTAGTTTGTATTTGACTGAAGATAATGGAAATCACGGTGTTCGTTATCACTATGACGGTACTGTAAATCAGTGGCAATTAATCAGGCGTGAAAGTGGCGTTGAAAATGTTGTAATGTACGGTTCTCGTTCAAACAACAATATCGTTGTTAATGGTATTGGGTACTTAAACACAACTCAGAGAATTTTTGCAGACAACTATCACCCGAATGCAGATAAATGGACAACTGCACGTACGCTGACATTAGCAGGTGAAGTGACTGGATCAGTGTCAATCGACGGCACATCAAACGTTACGATAAATGCTGTTCTACCGAACCATACTACATTTGAAGAAGTTGGTATAAGTGCGTCTAATTCAAATTATCGAGCAACGGGTAAAACTGATAACGGTAGCGATACAACGTCAGATCTTGATGCGCTAAATCAGGCGGGTACGTATTATAAACTCGTTGGTAGCACTGCCATTAACTTGCCTCCAAACGGAACTGGGTATTGGTATCTACAGAATTACACATATGGAACATCTGGCAATCTTACTCAACTAGCAATACCATACGGAACATCTGCGGGAAACGGTACAATATCGTTCAGAACACGATACAGTGGTGTTTGGGATGATTGGTCAACTCTATATCACACAGAGTTTCACCCAGAAGCTGATAAATGGACAACAGCTCGTACGTTGACGCTTTCAGGTGACGTTACTGGTTCAGTTTCGATTGATGGTAGCTCTAATGTGACGCTAACTACAGTTGTTGGCAATGACTCACACACGCATGATGGTCGTTACTATACTGAAACAGAATCAGATGCTAGGTTTGTGAATGTTACTGGCGACGCAATGACTGGGTTCTTGACACTGCCAAACACAAACGCAAACGCAACGAATATCATCTATGGGTTTGGTGGTACAAGTAACGGTCTTCGTGGATCAATGCAATATACGTCTGGTGATGTGTCTGATATAACGCGAAGTGGGTTCATTGACGTTGGCACATCTGTGACAGGCAGACCAGCAGGTGAGACTGGATGGCTGTGGGGGGTTCACGCCGAGCACAATAATGCAAATGGTTACTCAATGAACCTTGCAGTCGGTCAAAACACGCAACGTCTATGGTGGCAAAGTACAATAGCAACAACTGCCGGTGATTGGGTTGCTGTATTTGATGATGAGTATCATCCAAATGCAGACAAGTGGACTACTGCACGTACATTATCAATCGGTAACACCGGCAAACTAGTGGACGGTAGTTCTGATGTTTCATGGTCTCTTGCTGACATAGGCGCTCTGGCTCTAACTGGTGGAGTATTGAGCGGCGATACAACACTTGCGTTAGGCACCAAGTTATATATCGGCGGCGGTAACACTTCATACCTGTCTGATGGGGGTACTCAACATACTCCAACTCTATCAGGGTCAGGCAACGTTCTTATTCATGCTAATAACGATAATAACGGAACGACTGAATACGTTCAGATCCACGCAGGCTCAGATACAGTCGGGTTACGTGTTTCGACAAATGATATCACATTTAAAGGAAACACGGTATGGCACTTAGGTAATGATGGTGCAGGTAGCGGTCTTGATGCAGATAAACTTGATGGTCTGCAAGCGAGTCAATTCTTGCGTTCTGATGCCGCTAGTACAATCAACGGCCCGTTGACAGTTCGCCATACTAACGTTCAGTTGAACTTGATGGATTCAACTTACAGTGATAACTATTGGCAGCTTGATCATCAGAATGGTGTTCTTTCATTTAGATACAACGGGTTAGATGCTGATTTCGCATTGAATGAAAACGGTACTGCTGTGTTCGGTCATACTGTCACTGCACCGACATTTAGCGGGGCTCTTAGTGGCAATGCATCATCTGCAACTAAATTGCTAACATCAAGAACGTTAACTATCGGCAATACTGCAAAGTCATTTAACGGTACTGCTAACGTGTCATGGTCTCCTGAAGAACTGACTGGGGCTGAAGGTGATGCAAACATATCGTTTGGTAGTGGCCAATCTGTAACTACTGCTGAATTTTTATCTCTGTTGAATACTAAAGGGGCATTTTCAACCCAATATTGGGTTTGTCGTGGTTCTTGGTCGTATGCTGCTCAAGTTGTTGTTGACACAGGTGTTGGCAAATTCGGAACTGCTGGTTCAGTCATTGAAGTAATCGGCAAATCGCAAACTGGGTGTACGATTAGAGTTACAACGGCGACCACTAGCTCAGGCGGTGGTAATACACGTCGCGAGTTTATATACATTGACAACGGCTCGACTTATTCACCTGGCTGGCGTACTGGTTATAGCAATCACTATCACCCGAATGCAGACACGTGGACAACTGCTCGTACTCTGACATTGGCTGGTGATCTATCCGGTTCTGTATCAATCAATGGTGGGTCTAATGTAACTTTGACTGCTGCTGTTGCAAACGATTCGCACACTCACGATACTCAGTATGTGAAGACAAGCGGAAGCAGTACGATTACAAACGGAACATTAAACGCAGATGGTGCGGCATTTTCTGTATCGAAAGACGGTCGCCAGAGTTTGTCACAGATTCGCAATGACATAACAGGCATCAGTGGATATTGGCATCGTTTTCGTTCTAGTGGTAGTGGTGTGAGTGGTTGGTTATTCTCAAGCTTCGATACACCCGTTGCGCGAATCTCAACTGGTGGGTGGTACTACGGGTCTGGTGCGATTCTAAATGAATTGAAACTTGGTGGTGAAGTTGTTCTAAATGAATCAACTGACCGTGCTGACTTGTTGATGATTAAGAGTTCTACTTCTTCATGGGGTGGTTTGCAGATATCAAACTCTGCAAACGAGGGTATCTGGTCGTTCATGACAGACGGCGCGACGTGTGGCATTTACGATGATCAGAATGGCGACTGGGTTGTTCAGATGACTGAAAATGCTGGCGTTCGTCTGTATTACAACAGTGCCAATAGGATAGAAACAACATCTGCTGGTGTGACTGTTACTGGCGCATTGACTGCATCCGGTAACGTAACTGCATACTCAGATTCACGTTTGAAGACAAATGTTGAGAAAATCGTTAACCCGCTCGATAAGATTGATGAACTAAACGGTTACACATATGACCGTACAGACATCGAAGAACGTCAAACGGGTGTTATTGCTCAAGAAGTTCTAAAAGTACTACCTGAAGCAGTAATCGAAGATGATGATGGTATGTATTCAGTAGCATACGGAAACATGGTTGGTCTGTTGATTGAAGGCATCAAAGAAGAGAAACGCAAGCGTGAAGCACTAGAAGAGCGACTTGCAAGACTCGAATCATTACTAAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ee8f8da7e5576fb54bf2188466db29a65459d53d9bd0b3b35ffd124d0dab5842
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6487
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Vibrio natriegens Bacteriophage CZ01 Zhu,L. and Zhu,D. 2015-12 — GenBank