Protein

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Genbank accession
WDS51483.1 [GenBank]
Protein name
structural protein with Ig domain
RBP type
TSP
Evidence RBPdetect
Probability 0,50
Protein sequence
MEETMPTITVLVAPEVVRNKPETERNHVVTGVAKGWQKTSLNQDPDEILTECKGLDALLTKSNLQADGVTKVDPTKPIGFQVSYEIHDPNAILTTGLVITPATASGEIGQFVELLATVSPANATYQGVNWYSGDITKAVHVGGGKFKLLASGTVTVYGVTVEGNHTDSTVITVAGALSLSTDLPATKDVTSGQDGTFSVVAAGGTTPYTYVWHFSDTPGGAGSVIDAGTNATAATANLVITAVEAANEGEYWCVVSDADGHSVTSTRCEMAVV
Physico‐chemical
properties
protein length:273 AA
molecular weight: 28316,26910 Da
isoelectric point:4,55754
aromaticity:0,05861
hydropathy:0,03187

Domains

Domains [InterPro]
DC_0078
STR
1–197
DC_0078 cd00096
G3DSA:2.60.40.1080
STR
91–174
G3DSA:2.60.40.1080 IPR013783
IPR007110
STR
168–264
IPR007110
DC_2066
RBD
171–273
DC_2066
IPR036179
RBD
183–267
IPR036179
IPR003599
STR
184–273
IPR003599
PF13927
STR
186–256
PF13927
WDS51483.1
1 273
Architecture
STR
STR 1-273
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDS51483.1
1 273
Domain Start End Length (AA) Confidence
N-terminal 1 212 212 0,6961
Central domain 213 262 51 0,3333
C-terminal 263 273 10 0,9847
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-212
Central
213-262
C-terminal
263-273

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SeF6a
[NCBI] 		2876785 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS51483.1 [NCBI]
Genbank nucleotide accession
ON809764 [NCBI]
CDS location
range 106947 -> 107768
strand -
CDS
GTGGAGGAAACCATGCCAACAATCACAGTATTAGTCGCACCGGAAGTTGTCCGCAACAAACCCGAAACCGAACGCAATCATGTCGTGACGGGTGTTGCAAAGGGTTGGCAAAAGACCAGCCTCAACCAAGATCCTGATGAGATCCTGACCGAATGTAAAGGTCTTGACGCTCTGCTCACCAAGAGCAATTTACAAGCGGACGGTGTCACCAAAGTGGATCCCACCAAGCCTATCGGCTTTCAAGTATCTTATGAAATCCACGATCCGAATGCCATTTTAACCACCGGACTTGTGATTACTCCAGCTACAGCCAGCGGAGAGATCGGACAATTTGTTGAATTGCTAGCGACGGTATCCCCTGCCAATGCCACATATCAAGGCGTTAATTGGTATTCTGGTGATATTACGAAAGCTGTACATGTCGGTGGTGGTAAATTCAAATTACTGGCTTCAGGAACTGTAACGGTTTATGGTGTCACGGTTGAAGGGAATCACACAGATTCTACGGTTATTACAGTTGCAGGCGCTCTGTCTTTGTCTACTGATTTACCTGCCACCAAAGACGTAACTTCCGGACAAGACGGAACCTTTAGTGTTGTTGCTGCGGGCGGTACAACTCCATACACTTATGTGTGGCATTTCTCTGATACTCCTGGGGGTGCGGGGTCAGTTATCGATGCTGGCACTAATGCCACCGCCGCCACTGCTAACCTGGTTATCACAGCAGTTGAAGCCGCAAATGAAGGCGAATATTGGTGTGTGGTTTCTGATGCAGATGGCCATTCTGTCACGTCTACTCGTTGTGAAATGGCTGTGGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
36e5ff8e3fc84248c95b28a2c132e0c9f2ec6a727eb7d6998bed938cea76f38b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7224
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50