Protein

View in Explore
Genbank accession
AGH57632.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
RYNIEVNSNGGPYTSVFDDGYVEVSGKSDSEFQRAYEFALPGSGPWNVRVSRVTADNDSVYIQNSIFWQSFVEIIDEKFAYPNTALLALKIDARQFNSIPDVSVKLRGKRVQVPTNYNPETRTYTGIWDGTFQMAWTDNPAWIFRDIVLNERFGVRRYVNSIAIDPWYLYTVSQYCDELVPDGAGGYEPRFTCNVYLQNPGGVYEVLNALASCFRGLIYYSEGQLYLTQDRAQLPVQQFSEANVIQDVGENGEVSSPCFNYSGTARTARKTVVLANWDDPNQVYSSVTEYQQDDQLLERFGYNPIDLRLLGVTSRGQALRAAKHTLFSNRYETERVSFRIGAEGLAAGVGEVIQIADPLKQGQRLGGRIRAINGNTITLDAKLNLSESIDYTLTLVVPDGETETNPDGSITTRPKLQVLNLVSFTDIGEEVGERNIVTQSGDFFVTQQGTDFIVGIVRTSEETETKIELDGVIDSQVGALWVLEWSELNAALYKIISVAEIDPLIYQVEAVQYNDSKFAYVDNDLPIAVPKDRFTISSATAPTNLSAALRYSNGQTSIRATWKAPQRNDATDLLIRGYRYQWRKSGDTEWSEIAQTATTKVEIPLSLHVFGNSYQVRVASTNRLGSQSDWLVYDVDAFEAIPDLSDAEYNAVVRHQNQPDGTQLLIVDSGTCPIPERVSGYRCWAKPIDVPTVIPGVKEPDADGWYFLADIPLTGYYTIAFHAPGDWQIRVAFTSSIFGENPADYLYDTVDREKIVPPTPTNFSVVENYNGSGKRFSWQVPLTGYGSWDQNTVADIVGYEVRYKQGDLVNSSPSETWEAGIELASGGLPAQQQWFETALFDSDQWVVMVKTVDATQWRSDDPAYILVNITAPPINNAVQTINAKTQGAGNWPGDYDNCSVVSGDLVQTDATQDSTFTWTFDNNNLESALLLTTTADATYQHQIAALTGEAIEVTQEDDFNILQENDDKLLAEQRFYTESELSEGGVLHPYAPYEKLLADLYRVRTLFKSPDGGSTAGEITALTAQLDYADVVEKINDAAISSAGTAVSLTKTFRSVESVAITALQTGGSTAVTAVIVSKTTSAVTVKCLDSSGSAVAGTVDLIVTGY
Physico‐chemical
properties
protein length:1107 AA
molecular weight: 122264,12360 Da
isoelectric point:4,43955
aromaticity:0,10479
hydropathy:-0,26631

Domains

Domains [InterPro]
DC_0129
STR
1–666
DC_0129 DC_1836
IPR053171
Unmapped
2–404
IPR053171 IPR013783
IPR055385
ATT
2–77
IPR055385 IPR032876 IPR003961
IPR036116
STR
541–630
IPR036116
IPR003961
STR
541–643
IPR003961
AGH57632.1
1 1107
Architecture
ATT
STR
ATT
STR
RBD
ATT 1-77 | STR 78-202 | ATT 203-372 | STR 373-666 | RBD 841-1107
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage KBS-S-2A
[NCBI] 		889953 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH57632.1 [NCBI]
Genbank nucleotide accession
HQ634187.1 [NCBI]
CDS location
range 1 -> 3324
strand +
CDS
CGTTACAACATTGAAGTCAACTCAAATGGCGGGCCTTATACGAGTGTTTTTGATGATGGATATGTTGAAGTTAGCGGCAAATCAGATAGCGAATTTCAGCGAGCCTATGAGTTTGCGTTGCCTGGTAGCGGCCCGTGGAACGTGCGGGTTTCTCGCGTAACGGCAGACAACGATTCTGTCTATATTCAAAATTCAATCTTCTGGCAAAGTTTTGTAGAAATTATTGATGAAAAGTTTGCCTACCCTAACACCGCACTACTTGCGTTAAAAATTGACGCACGGCAATTCAATTCAATTCCAGATGTATCCGTCAAACTTCGGGGTAAGCGTGTTCAGGTTCCGACTAACTACAATCCCGAAACTCGCACTTACACCGGAATCTGGGATGGCACGTTCCAGATGGCATGGACCGATAATCCAGCGTGGATCTTCCGTGACATCGTTTTAAACGAGCGTTTTGGTGTCAGACGGTATGTCAACTCAATCGCAATCGACCCTTGGTATCTCTACACCGTTAGCCAGTATTGCGACGAGTTGGTCCCTGATGGTGCAGGTGGTTACGAGCCACGTTTTACATGTAATGTTTACCTGCAGAATCCTGGCGGCGTTTATGAAGTTCTCAATGCGCTAGCGTCATGTTTCCGTGGTTTAATTTATTACAGCGAAGGGCAACTGTATTTAACGCAAGATCGCGCTCAACTTCCTGTCCAGCAATTCAGCGAAGCTAACGTCATCCAAGATGTTGGCGAAAACGGTGAAGTATCTTCGCCCTGTTTTAATTACAGCGGCACTGCAAGAACAGCGCGCAAGACTGTTGTTCTGGCGAACTGGGACGATCCAAATCAGGTTTATTCTAGTGTTACTGAATACCAGCAAGACGATCAACTGCTGGAGCGTTTTGGGTATAACCCAATTGATCTTCGGTTGCTTGGAGTAACATCACGCGGCCAAGCATTACGCGCAGCAAAACATACGCTATTTAGCAATCGGTACGAGACTGAGCGTGTCAGCTTCCGCATTGGCGCCGAAGGTCTTGCTGCTGGTGTCGGTGAAGTAATTCAGATTGCCGATCCACTGAAGCAAGGTCAACGCCTTGGCGGGCGAATCAGGGCAATCAATGGAAACACGATTACGCTTGATGCAAAATTAAATCTAAGCGAAAGCATTGATTACACATTGACGCTGGTCGTTCCCGACGGGGAAACAGAAACGAATCCTGACGGAAGTATTACTACAAGACCCAAGCTGCAGGTTCTGAATCTGGTTAGCTTTACCGATATTGGAGAAGAAGTTGGTGAGCGAAATATCGTTACTCAATCTGGCGACTTTTTCGTAACACAACAGGGCACTGATTTTATTGTTGGTATTGTTCGCACATCAGAAGAAACAGAAACCAAGATTGAGCTTGATGGTGTTATTGATTCTCAAGTCGGCGCCTTGTGGGTGCTGGAATGGTCTGAACTTAATGCAGCACTGTATAAAATTATTTCCGTAGCAGAAATCGACCCGCTAATTTACCAAGTTGAAGCTGTTCAGTACAACGACAGCAAATTTGCTTATGTCGATAACGATCTTCCGATTGCCGTACCAAAAGATCGCTTTACCATTTCAAGCGCAACAGCACCAACAAATCTTTCGGCGGCACTGCGTTATTCCAATGGTCAAACATCAATTCGTGCAACATGGAAAGCACCACAAAGGAACGATGCGACCGATCTTTTGATTCGTGGTTACAGATACCAATGGCGCAAATCTGGCGATACCGAATGGTCTGAAATAGCGCAAACTGCAACAACTAAAGTTGAAATTCCACTTTCGTTGCATGTTTTTGGTAACAGCTATCAAGTCCGTGTCGCATCAACCAATCGCTTGGGCAGCCAATCTGACTGGCTTGTATATGATGTTGATGCGTTTGAAGCAATTCCAGATCTTTCAGACGCTGAGTACAACGCCGTCGTTCGCCACCAAAACCAACCAGACGGCACTCAACTGCTGATCGTTGATTCTGGTACGTGCCCAATTCCAGAGCGAGTTTCGGGTTATCGGTGCTGGGCCAAACCAATTGATGTGCCCACAGTCATCCCAGGTGTCAAAGAGCCTGATGCTGATGGCTGGTACTTCTTGGCCGATATTCCGTTGACGGGATATTACACGATTGCTTTCCACGCTCCAGGTGATTGGCAGATCCGTGTTGCATTTACAAGTTCAATTTTTGGCGAAAATCCAGCGGATTATCTGTACGACACGGTGGATCGTGAAAAGATCGTGCCGCCAACGCCAACAAATTTCAGTGTTGTTGAGAATTACAACGGCAGCGGCAAGCGGTTTAGCTGGCAAGTACCACTGACAGGGTACGGAAGTTGGGATCAAAACACAGTTGCCGATATTGTCGGCTATGAAGTGCGTTACAAACAGGGCGATCTTGTCAATAGCAGCCCATCTGAAACATGGGAAGCAGGCATTGAATTGGCATCTGGCGGATTACCCGCTCAGCAGCAGTGGTTTGAAACTGCTTTGTTTGACTCTGACCAGTGGGTCGTCATGGTTAAAACCGTTGACGCAACGCAATGGCGTTCAGATGACCCTGCATACATTCTTGTTAACATTACGGCACCGCCAATTAACAATGCAGTGCAAACGATTAACGCAAAAACGCAGGGTGCAGGAAACTGGCCAGGTGACTACGACAACTGCTCTGTTGTTTCTGGCGACTTGGTTCAAACCGATGCAACGCAAGACAGCACGTTTACATGGACATTTGACAACAACAATCTTGAAAGCGCACTGCTGCTAACAACAACGGCTGATGCAACCTATCAGCATCAAATTGCTGCATTGACCGGTGAAGCGATTGAAGTAACGCAAGAAGATGATTTTAACATTTTGCAAGAAAATGATGACAAGCTTTTGGCTGAACAGCGGTTTTACACCGAATCGGAACTTTCGGAAGGCGGTGTTTTGCATCCCTACGCGCCATACGAAAAACTACTTGCAGACTTGTATCGCGTCAGGACACTGTTCAAGAGTCCCGATGGCGGTTCAACTGCTGGAGAGATTACAGCATTAACGGCACAGCTTGATTACGCTGATGTGGTTGAAAAGATCAATGATGCCGCAATTTCCAGTGCTGGAACGGCGGTAAGTCTGACGAAAACATTCCGCAGCGTAGAAAGCGTTGCCATCACTGCACTACAAACAGGTGGCTCAACTGCTGTCACGGCAGTTATAGTGAGTAAAACGACCAGTGCTGTTACAGTGAAGTGTCTCGACTCATCTGGCAGCGCAGTTGCCGGTACTGTTGATCTCATCGTTACTGGGTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9542ac587aa3470acd6d2a6859b20507e4c03843d592b5a91722049cd096792f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7632
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence for Lactobacillus helveticus CNRZ 32, an Industrial Cheese Starter and Cheese Flavor Adjunct Broadbent,J.R., Hughes,J.E., Welker,D.L., Tompkins,T.A. and Steele,J.L. 2013 23969047 GenBank
The Genome Sequence of Cyanophage KBS-S-2A Henn,M.R., Lennon,J., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank