Protein

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Genbank accession
XZO20945.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
Protein sequence
MSYKQSAYPNLLMGVSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTDQPWPRPFLYHTNLGGRSIAMLVAQHRGELYLFDERDGRLLMGQPLVHDYLKANDYRQLRAATVADDLFIANLSVKPEADRTDIKGVDPNKAGWLYVKAGQYSKAFSLTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYALPNSTKKYPKVDPDPAAATVAGYLNQRGVQDGYIAFRGDGDIVVEVSTDMGNNYGIASGGMSLNATADLPALLPGVGAPGVGVQFMDGAIMATGSTKAPVYFEWDSANRRWAERAAYGTDWVLKKMPLALRWDEATDTYSLNELEYDRRGSGDEDTNPTFNFVTRGITGMTTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSGYLVFGTSTADEMICHQYLWQGNEKVQNAFHRWTLRHQIIGAYFTGDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVDGELELTKQHWDLIKDGAAVYQLQPQAGAYMERYQLGVKRETNTKVFLDVPEAVVGSVYVVGCEFWSKVEFTPPVLRDHNGLPMTSTRAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSRQLNAGEPLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQTYRRV
Physico‐chemical
properties
protein length:826 AA
molecular weight: 91983,70350 Da
isoelectric point:5,98619
aromaticity:0,10896
hydropathy:-0,33257

Domains

Domains [InterPro]
IPR058003
TTP
1–817
IPR058003
DC_0058
STR
1–826
DC_0058
XZO20945.1
1 826
Architecture
STR
STR 1-826
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XZO20945.1
1 826
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9911
Central domain 141 339 200 0,1702
C-terminal 340 826 486 0,2972
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-339
C-terminal
340-826

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage 20176-1
[NCBI] 		3373948 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XZO20945.1 [NCBI]
Genbank nucleotide accession
PQ510338 [NCBI]
CDS location
range 26798 -> 29278
strand +
CDS
ATGAGCTACAAGCAATCCGCGTATCCCAATCTGCTGATGGGTGTGAGCCAGCAGGTGCCCTTCGAGCGCCTGCCGGGCCAGCTCAGCGAGCAGATCAACATGGTATCCGATCCCGTGTCAGGACTTCGGCGGCGCAGCGGTATCGAGCTGATGGCCCACCTGCTGCATACCGACCAGCCCTGGCCGAGGCCGTTCCTCTACCACACGAACCTCGGTGGCCGCAGCATTGCGATGCTGGTGGCGCAGCACCGTGGTGAGCTGTACCTGTTCGACGAGCGGGACGGTCGCCTGCTGATGGGTCAGCCCCTGGTGCATGACTACCTCAAGGCCAACGATTACAGGCAGCTACGGGCCGCCACGGTGGCCGATGACCTGTTCATCGCCAACCTGAGCGTGAAGCCCGAGGCCGACCGCACCGACATCAAGGGCGTAGACCCCAACAAGGCCGGCTGGCTGTACGTCAAGGCAGGCCAGTATTCGAAGGCATTCTCCCTGACCATCAAGGTCAAGGACAACGCCACGGGCACCACCTACAGTCACACGGCCACCTACGTGACACCGGACAACGCCAGCACGAACCCCAACCTCGCTGAGGCACCGTTCCAAACGAGCGTGGGCTACATCGCTTGGCAACTCTACGGCAAGTTCTTCGGCGCCCCGGAGTACGCCCTGCCCAACTCCACGAAGAAGTACCCGAAGGTTGACCCTGACCCGGCTGCGGCTACGGTAGCCGGCTATCTCAACCAGCGAGGCGTGCAGGACGGCTACATCGCCTTCCGGGGCGACGGGGACATCGTGGTCGAGGTGTCCACGGATATGGGCAACAACTACGGCATCGCGTCAGGTGGTATGAGCCTCAATGCTACGGCGGACCTGCCGGCCTTGCTGCCGGGAGTCGGTGCCCCTGGTGTGGGGGTGCAGTTCATGGACGGCGCTATCATGGCCACCGGCTCTACCAAGGCCCCGGTATACTTCGAGTGGGATTCCGCTAACCGCCGCTGGGCAGAGCGGGCCGCCTACGGCACCGATTGGGTCCTGAAGAAGATGCCACTGGCCCTGCGCTGGGATGAGGCTACCGACACCTACAGCTTGAACGAGCTGGAGTATGATCGACGTGGCTCCGGCGACGAGGATACGAACCCCACGTTCAACTTCGTCACCCGAGGCATCACCGGCATGACGACCTTCCAGGGTCGCCTCGTCCTCCTGTCGCAGGAGTACGTCTGCATGTCGGCCAGTAACAATCCGCACCGCTGGTTCAAGAAGTCGGCGGCCGCGCTGAACGACGACGATCCTATCGAGATCGCAGCCCAGGGGAGCCTGACTGAGCCGTACGAGCACGCGGTCACCTTCAACAAGGACTTGATCGTCTTCGCCAAGAAGTATCAGGCCGTGGTCCCCGGTGGCGGCATTGTAACTCCCCGGACGGCGGTTATCAGCATCACCACGCAGTACGACCTCGATACCAGGGCGGCACCTGCCGTGACTGGCCGCAGTGTATACTTCGCTGCGGAGCGTGCCCTGGGTTTCATGGGCCTGCATGAGATGGCCCCGTCGCCGTCCACGGACAGCCACTACGTCGCCGAAGACGTTACCAGCCACATCCCGAGCTACATGCCGGGGCCGGCTGAGTACATCCAGGCGGCGGCCTCCAGCGGCTACCTGGTGTTCGGCACCAGCACGGCGGACGAGATGATCTGCCACCAGTACCTCTGGCAGGGCAACGAGAAAGTCCAGAACGCCTTCCACCGATGGACACTGCGGCATCAGATCATCGGCGCCTACTTCACTGGCGACAACCTGATGGTCCTGATTCAGAAGGGCCAGGAGATCGCGCTGGGTCGGATGCACCTCAACAGCCTGCCGGCTCGCGAGGGTCTGCAATATCCGAAGTACGACTACTGGCGCCGTATTGAGGCAACCGTGGACGGCGAGCTGGAGCTGACCAAGCAGCATTGGGACCTGATCAAGGATGGCGCCGCAGTGTACCAGCTCCAGCCGCAGGCAGGGGCCTACATGGAGCGGTACCAGCTCGGCGTGAAGCGCGAGACGAACACGAAGGTGTTCCTTGACGTGCCGGAGGCTGTGGTGGGTTCGGTGTACGTGGTCGGCTGCGAGTTCTGGTCGAAGGTGGAGTTCACCCCGCCCGTGCTGCGGGACCACAACGGCCTGCCCATGACCTCGACCCGAGCAGTGCTGCACCGGTACAACGTCAACTTCGGATGGACTGGCGAGTTCCTGTGGCGCATCAGCGACACGGCGCGGCCCAACCAGCCGTGGTACGACACGACCCCGCTCCGCCTGTTCAGTCGCCAGCTCAACGCCGGCGAGCCGCTGGTAGACAGCGCGGTAGTGCCGCTGCCGGCACGGGTGGACATGGCGACCTCGAAGTTCGAGCTGAGCTGCCATAGCCCTTACGACATGAACGTCCGGGCTGTCGAGTACAACTTCAAATCCAACCAGACCTACAGGAGGGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
761f4554d7563d47e5a153e75eafa455f89d533f9d93cc6cc46e2256b88da59d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3005
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage training: Pseudomonas aeruginosa Burke,K.A., A Filippov,A.A., Nikolich,M.P. and Peters,T.L. 1998-10 — GenBank