Protein

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Genbank accession
XRL27786.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSNVRVLQRSFGGGEISPEMFGRIDDVKYQSGLAICRNFVVKPQGPAENRAGFAFVREVKDSAKKVRLIPFTYSVTQTMVIELGAGYFRFHTNGGTLLDGAVPYEIANPYAEADLFNINYVQSADVLTLVHPNYAPRELRRLGATNWQLATIAFTSPVATPTSVTATSNNKGTDYTYRYVVTALDAEGKTESAPSSAGTCTNNLFTNGGANTIAWSASSGASRYNVYKEQGGLYGYIGQTTGTSLVDDNIAPDLSVTPPIYDAVFNAAGDYPAAVSYFEQRRCFAGTTNKPQNIWMTRSGTESAMSYSLPVRDDDRVAFRVAAREANAIRHIVPLTELLLLTSSGEWRVASVNSDAVTPTTISVRPQSYVGATDVQPVVVNNTTIYGAARGGHVRELAYNWQANGFVTGDLSLRAAHLFDNLDILDMAYAKAPQPIVWFISSSGKLLGLTYVPEQQIGAWHQHDTDGVFESCAVVAEGNEDRLYAVVRRTIGGNEVRYVERMASRQFDAQADAFFVDSGLTYSGEPVSHISGLEHLEGKTVSILADGAVHPQRVVTDGAIDLDVEAGTVHIGLPITAELQTLPVAMQLDGSFGQGRVKNINKLWLRVHRSSGIFAGPHADALTEVKQRTSEPYGSPPALKSEEIPLVLSPKWGDSGQLFVRQADPLPLMIVSMSAEIAIGA
Physico‐chemical
properties
protein length:681 AA
molecular weight: 73641,82740 Da
isoelectric point:5,47743
aromaticity:0,08957
hydropathy:-0,12878

Domains

Domains [InterPro]
DC_0058
STR
1–679
DC_0058
IPR013783
STR
194–257
IPR013783
XRL27786.1
1 681
Architecture
STR
STR 1-679 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRL27786.1
1 681
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,9947
Central domain 156 363 209 0,0908
C-terminal 364 681 317 0,1561
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-363
C-terminal
364-681

Taxonomy

  Name Taxonomy ID Lineage
Phage Bordetella phage vB_BbrP_003
[NCBI] 		3410948 No lineage information
Host Bordetella bronchiseptica
[NCBI] 		518 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRL27786.1 [NCBI]
Genbank nucleotide accession
PV330005 [NCBI]
CDS location
range 25012 -> 27057
strand +
CDS
ATGTCCAACGTCCGCGTCCTGCAACGCTCTTTCGGCGGCGGTGAAATCAGCCCGGAAATGTTCGGGCGCATCGACGACGTGAAGTACCAAAGCGGCCTCGCCATCTGCCGCAACTTCGTGGTCAAGCCCCAAGGCCCGGCCGAGAACCGCGCCGGCTTCGCCTTCGTGCGCGAGGTGAAGGATTCGGCCAAGAAGGTGCGGCTCATCCCGTTCACCTACTCGGTCACGCAAACAATGGTGATCGAGTTGGGTGCGGGTTATTTTCGCTTCCATACCAACGGCGGCACGCTGCTGGACGGCGCCGTGCCCTACGAAATCGCCAATCCCTACGCCGAAGCCGACCTGTTCAACATCAACTATGTCCAGTCGGCTGACGTGCTCACGCTCGTGCATCCGAACTATGCGCCGCGTGAACTGCGCCGCCTGGGCGCGACCAACTGGCAACTGGCGACCATCGCCTTCACGTCGCCGGTGGCTACGCCCACGAGCGTGACCGCCACGTCGAACAACAAGGGCACCGACTACACCTACCGCTACGTGGTCACGGCCTTGGACGCCGAGGGTAAGACCGAGTCCGCGCCATCGTCGGCCGGCACCTGCACCAACAACCTGTTCACCAACGGCGGCGCCAACACCATCGCGTGGTCGGCCTCGTCCGGCGCGTCGCGCTACAACGTCTATAAGGAGCAAGGCGGCCTGTACGGCTATATCGGCCAGACCACCGGCACCTCGCTGGTGGACGACAATATCGCGCCCGACCTGTCCGTCACGCCCCCGATCTACGACGCCGTGTTCAACGCCGCCGGCGATTACCCTGCGGCCGTGTCCTACTTCGAGCAGCGCCGGTGCTTTGCCGGCACGACCAACAAGCCACAGAACATTTGGATGACGCGCAGCGGCACCGAATCGGCCATGTCGTACTCGCTGCCCGTGCGCGACGATGACCGCGTTGCCTTCCGGGTGGCCGCGCGCGAGGCCAACGCCATCCGCCATATCGTGCCGCTCACCGAGTTGCTACTGCTCACGTCTTCGGGCGAATGGCGAGTGGCTTCGGTGAACTCCGACGCGGTAACGCCCACCACCATCAGCGTGCGGCCGCAGTCCTACGTTGGAGCCACCGACGTGCAGCCGGTCGTGGTCAACAACACGACCATCTACGGCGCCGCGCGCGGCGGCCACGTGCGCGAACTGGCCTATAACTGGCAGGCCAACGGCTTCGTCACCGGCGACCTGTCCCTGCGTGCGGCGCACCTGTTCGACAACCTCGACATCCTGGACATGGCCTATGCGAAGGCCCCGCAGCCTATCGTGTGGTTCATCAGCAGCAGCGGCAAGCTGCTGGGCCTCACCTACGTGCCCGAGCAACAGATCGGCGCGTGGCACCAGCACGACACGGACGGCGTGTTCGAGTCCTGCGCGGTGGTGGCCGAGGGTAACGAGGATCGGCTCTACGCTGTCGTGCGTCGCACCATTGGAGGCAACGAGGTGCGATACGTCGAGCGCATGGCCTCGCGCCAGTTCGATGCCCAGGCGGACGCCTTCTTCGTCGATAGCGGCCTGACGTACTCGGGCGAGCCGGTAAGCCATATCAGCGGCCTGGAGCACCTCGAAGGGAAAACCGTCAGCATCCTGGCCGATGGCGCGGTGCATCCGCAGCGCGTCGTCACTGACGGCGCCATTGACCTGGACGTGGAGGCCGGCACCGTGCATATCGGCCTGCCCATCACCGCAGAACTGCAAACCCTGCCGGTGGCGATGCAACTGGACGGCAGCTTCGGCCAAGGGCGCGTCAAGAACATCAACAAGCTGTGGTTGCGCGTGCATCGGTCGTCGGGCATCTTCGCCGGCCCGCACGCGGACGCGCTCACCGAGGTGAAGCAGCGCACGTCCGAACCCTACGGCTCACCGCCTGCACTCAAGAGCGAGGAAATTCCGCTCGTCCTGTCGCCGAAATGGGGCGACAGCGGGCAACTGTTTGTGCGGCAGGCCGACCCTCTGCCGTTGATGATCGTGTCGATGTCGGCGGAAATCGCCATCGGCGCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5ed1dae7eb9ec5c5b08aa59c6bfafa29d9af9039f710cfb1947bde8fa9e2dc51
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9446
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50