Protein

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Genbank accession
WWT36669.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MADLKHGSTVGGSPIWTQGNLTIQPAGDQLFYKGHKIYTAFDKPTAEDSDSVSATEGGTFQKLVHFEEGLSVGSASGGETKKNGIFKGKSDAANFDGVSWGLHSWKSIGFVNARDDVIMAYIDTTTGDFKTKGTIEGTTIKDTGQRVYSPVNKPTNNDLDLVSRRGDTLTGTYNLNTVTVKLSVDSKLIARGRDLINFDATKIYYGNVLDTLVFRSKDEPTIFVNGKEGRFYHTNNKPTKADVGLGNVTNDAQVKRAGDIMEGNLQAPRMLATNDPAGPNELVRLSYFEKKSMVANPTIIGNVDWNTLINRGIYRVENAGSGTNKPSDSYYNGVLMVYRPEDAVGTRRIVQVYYPESIDHPMCWRSCSNESWTAWNYVDHRKLADARYVNVTGDTMTGALTVPAANGVRTAKANYNGDNCYAGLNSLDGTAMIHRVSDIKAHEKLGITHDSKIIFVKSRNNTQDTDTFELYHEGHKPTPDDVGAVPLNAVIDFGTF
Physico‐chemical
properties
protein length:496 AA
molecular weight: 54316,91770 Da
isoelectric point:6,32399
aromaticity:0,08871
hydropathy:-0,49214

Domains

Domains [InterPro]
DC_0466
STR
1–145
DC_0466 DC_1616
DC_1142
STR
110–274
DC_1142 cd19958
WWT36669.1
1 496
Architecture
STR
STR
RBD
STR 1-274 | STR 291-379 | RBD 380-489 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WWT36669.1
1 496
Domain Start End Length (AA) Confidence
N-terminal 1 27 27 0,9583
Central domain 28 252 226 0,1924
C-terminal 253 496 243 0,8248
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-27
Central
28-252
C-terminal
253-496

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage UPWr_E1
[NCBI] 		3127569 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWT36669.1 [NCBI]
Genbank nucleotide accession
PP418985.1 [NCBI]
CDS location
range 59695 -> 61185
strand -
CDS
ATGGCAGATTTGAAACATGGATCTACTGTAGGCGGATCTCCCATTTGGACGCAAGGAAACTTGACGATCCAGCCAGCGGGGGACCAGCTTTTCTATAAAGGTCATAAAATCTATACTGCGTTTGACAAGCCGACGGCGGAAGATTCTGATTCCGTCAGTGCAACCGAAGGTGGTACATTTCAGAAACTGGTCCATTTTGAGGAAGGTTTAAGCGTAGGTAGCGCATCCGGTGGAGAAACCAAAAAGAACGGGATCTTTAAAGGCAAGAGTGATGCTGCTAACTTTGATGGTGTAAGTTGGGGTTTGCATTCGTGGAAATCCATCGGCTTTGTTAATGCTCGTGATGATGTTATCATGGCTTATATTGACACTACCACAGGTGATTTTAAAACTAAAGGGACCATCGAAGGGACAACCATTAAAGACACTGGTCAACGCGTCTATAGCCCTGTTAATAAGCCGACGAATAATGATTTAGATTTGGTGTCTCGTCGCGGTGATACTCTCACAGGAACATATAATTTAAACACTGTCACTGTTAAACTATCGGTTGATTCGAAATTAATTGCAAGGGGACGTGATTTAATTAATTTTGATGCGACTAAGATCTATTATGGTAACGTTCTTGATACGTTGGTATTCCGTAGCAAAGATGAGCCTACCATTTTTGTTAATGGCAAAGAAGGTCGTTTTTATCACACCAACAATAAACCAACTAAAGCCGATGTTGGACTAGGTAATGTCACCAATGATGCACAGGTTAAACGTGCTGGTGATATTATGGAAGGTAACTTGCAAGCGCCTAGAATGTTGGCGACAAACGATCCTGCTGGTCCGAATGAATTGGTTCGTTTGAGCTACTTTGAGAAAAAATCAATGGTAGCAAATCCAACAATCATTGGAAACGTTGATTGGAACACTCTTATTAATCGCGGTATCTATCGTGTGGAAAATGCTGGATCAGGTACTAATAAACCGTCTGATAGCTATTATAACGGCGTTTTGATGGTATATCGCCCAGAAGATGCGGTCGGTACTCGTCGAATTGTTCAGGTATATTATCCTGAATCTATTGATCATCCGATGTGCTGGCGTTCTTGTTCTAATGAATCATGGACCGCATGGAACTATGTAGATCACCGTAAATTGGCTGATGCTCGCTATGTTAATGTGACTGGCGATACCATGACAGGTGCGTTGACAGTTCCTGCTGCAAACGGCGTTCGTACAGCAAAAGCTAACTATAATGGTGACAATTGCTACGCTGGACTTAATAGCTTAGATGGCACAGCAATGATTCATCGTGTTAGTGATATTAAAGCGCACGAGAAACTAGGCATCACACATGATTCTAAAATTATTTTCGTTAAATCCCGAAACAATACTCAGGACACAGATACATTTGAATTATACCACGAAGGACACAAACCAACTCCTGATGATGTTGGCGCTGTTCCGCTTAATGCGGTAATTGATTTTGGTACTTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0bc99f618526adb2082bd91412606e0eb597ec237ccfdd23bce1759dd6eaed5e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6893
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage cocktail for biofilm control in poultry environments Sliwka,P., Saez Moreno,D., Korzeniowski,P., Milcarz,A., Kuczkowski,M., Koziol,S., Narajaczyk,M., Kolenda,R., Roesler,U., Tomaszewska-Hetman,L. and Kuzminska-Bajor,M. 2014-04-04 — GenBank