Protein

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Genbank accession
YP_009101062.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MPTLINRPFAQSGDVSVVPDASPSGYVNFQRGYTPDYALALEAGNVAAKAVERESMNWLLNLITDNLMFIQDHGAQQYFSSDLKPDGYPKNAIVVSNSGTPSAPEWRIFQSVVDGNTSAVPANGETESWQELTLPSEARKYIPMPAGGDAQNPYFVRGLISSFVDFDNITTSTTIVIQSDAVAALCSNIPNAVGATKVAGRLQVCAWQVNAQTFALQQYTSMNGYLFTRSYTSGAWSAWIQNATVQDVQIGTPNLASGKGAQDIILTVPAGYSWPPSAGSRLTIVNDVTTTGPVTVTIGVNKVAVLGFDGGELPAGAIVGLLPFTIIYDGAVWRLLQAFGAAQIGVDATEPQQFVTKRQLDALAAKLITMGDVFEVGETRFLTNGTNPNTKLGAYGQVWTRLPDNMVIRTSGTSRNGLATGGADSVTLTAAMLPLHNHSVNITTRQSGPWSNTTGDAGNHNHTGDTSQNGAHSHGMDAAGNHYHDSGWGEAYADQARYGVYDGTHNNLGSARSDYDNYKYNTSTNGNHVHNIQSSGSHTHGLNINYAGNHSHGYTLPAHTHDVVGNTGDAGQSVPTAVATLPRYVVLNGWYRSA
Physico‐chemical
properties
protein length:594 AA
molecular weight: 63203,08340 Da
isoelectric point:5,63265
aromaticity:0,08754
hydropathy:-0,25354

Domains

Domains [InterPro]
DC_0930
STR
1–354
DC_0930 DC_0348
cd19958
STR
157–241
cd19958
YP_009101062.1
1 594
Architecture
STR
RBD
STR 1-354 | RBD 480-594
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ECML-117
[NCBI] 		1204521 Uroviricota > Caudoviricetes > Lindbergviridae > Wifcevirus ECML117 >
Host Escherichia coli O157:H7
[NCBI] 		83334 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009101062.1 [NCBI]
Genbank nucleotide accession
NC_025441 [NCBI]
CDS location
range 40405 -> 42189
strand +
CDS
ATGCCAACACTTATTAACAGACCTTTCGCGCAAAGCGGTGATGTATCCGTGGTGCCGGATGCAAGCCCAAGCGGTTATGTGAACTTCCAGCGCGGCTACACTCCTGACTATGCGCTTGCGCTGGAGGCCGGAAACGTCGCCGCGAAAGCTGTTGAGCGCGAATCGATGAACTGGTTGCTGAATTTGATTACAGACAACCTTATGTTTATTCAAGATCATGGCGCTCAACAATATTTCTCTTCTGACTTGAAGCCGGATGGATACCCGAAAAACGCCATTGTTGTCAGCAACTCTGGAACGCCTTCAGCACCTGAGTGGCGCATCTTTCAAAGCGTGGTCGACGGCAACACAAGCGCCGTACCAGCTAACGGAGAAACGGAATCTTGGCAGGAATTAACACTGCCCAGCGAAGCGCGAAAATACATTCCTATGCCTGCTGGCGGCGATGCGCAAAACCCGTACTTCGTTCGCGGATTGATTTCAAGCTTTGTTGACTTCGATAATATTACGACTTCCACAACTATCGTCATTCAATCCGATGCCGTCGCCGCTCTTTGCTCTAACATCCCGAATGCGGTTGGCGCAACGAAGGTTGCAGGTCGACTGCAGGTCTGCGCTTGGCAGGTCAATGCGCAGACCTTTGCTTTGCAGCAATATACATCAATGAATGGCTATTTGTTTACTCGCTCTTATACTTCTGGTGCTTGGAGTGCTTGGATTCAAAATGCCACTGTTCAAGACGTGCAAATCGGAACTCCAAACCTTGCATCTGGTAAAGGCGCGCAAGATATAATCCTCACCGTTCCAGCAGGGTATTCATGGCCGCCTTCTGCGGGTAGTCGTTTGACCATCGTCAATGACGTGACTACTACCGGACCTGTCACCGTGACCATTGGTGTAAACAAAGTTGCCGTTCTTGGATTCGACGGCGGCGAGTTACCAGCTGGCGCTATCGTAGGCTTGTTGCCATTCACCATCATTTATGACGGCGCTGTTTGGCGTCTCCTTCAGGCATTTGGCGCGGCGCAAATCGGCGTTGATGCTACTGAGCCGCAACAGTTTGTTACAAAGCGCCAACTCGATGCTTTGGCTGCGAAGTTGATCACTATGGGTGACGTATTCGAAGTCGGTGAGACTCGATTCCTTACCAACGGAACCAACCCAAATACTAAACTGGGCGCTTACGGTCAGGTATGGACACGACTGCCTGATAACATGGTCATTAGAACATCTGGAACGTCGCGGAACGGTCTTGCCACTGGCGGCGCGGACTCTGTCACCCTTACCGCTGCCATGCTCCCTCTTCACAACCACAGCGTAAACATAACTACGCGTCAGAGCGGCCCATGGTCCAATACTACTGGAGATGCTGGAAATCACAACCACACAGGCGATACCAGTCAGAACGGCGCTCACTCTCATGGTATGGATGCAGCAGGAAATCATTACCATGACAGCGGTTGGGGAGAGGCGTATGCGGACCAAGCGCGTTACGGAGTTTATGACGGTACTCACAACAACCTTGGGAGTGCAAGGTCTGATTATGATAACTACAAATACAACACTTCAACTAATGGCAACCACGTCCATAATATTCAATCTTCTGGATCACACACTCATGGTTTGAATATAAATTACGCTGGCAATCACAGCCATGGCTATACCCTTCCCGCTCACACTCACGATGTGGTCGGTAATACTGGCGATGCAGGGCAGTCGGTGCCAACGGCTGTTGCGACTTTGCCGCGATACGTTGTTTTGAATGGCTGGTACAGAAGCGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3cce24de0fa2d453fdff7a8d3208e5021d1187bcb2462880cf3eb16b891f70f8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7330
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage cocktail significantly reduces contamination of lettuce and beef with Escherichia coli O157:H7, but does not protect against recontamination Carter,C., Parks,A.R., Abuladze,T., Li,M., Senecal,A., Kropinski,A. and Sulakvelidze,A. 2012-07 — GenBank