Protein

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Genbank accession
YP_010742564.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGAGILIDYNDGRPRMEITAGLRAPSYCTSFNQRAQSNKTLTINTPLTAGSQVVVALTRPVEVIEVFDQTLVIPDPFYVTSVTRNGNSGITLRGDDAYGAYSGLPQWAGVIMEVLPVGSRNAGLLVANSTDFTAISNVAKLMTCRYAKRVRVNGSMALPVSGVPFARWDDGNVSVGFDGGSIIVRNASYGGIDDVAASVDMDLVIFNNTPPTPGTGITMTNNQNQVTFSTVNKPFVYDRTINIGTSDQNIGNSLIQLSYTGALIQNNGGYNHVRMNGIRMAGNNVRVAKNRVIGNYSRQQFQMPGKNIAVPTPLLVIPNMY
Physico‐chemical
properties
protein length:321 AA
molecular weight: 34492,77920 Da
isoelectric point:9,24607
aromaticity:0,07477
hydropathy:-0,06168

Domains

Domains [InterPro]
IPR045604
STR
4–297
IPR045604
YP_010742564.1
1 321
Architecture
STR
STR 4-297 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010742564.1
1 321
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,6185
Central domain 11 209 200 0,0180
C-terminal 210 321 111 0,9979
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-321

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Oekolampad
[NCBI] 		2851982 Uroviricota > Caudoviricetes > Dhillonvirus >
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010742564.1 [NCBI]
Genbank nucleotide accession
NC_073089 [NCBI]
CDS location
range 20654 -> 21619
strand -
CDS
ATGGGCGCTGGAATACTTATCGACTATAACGACGGAAGACCGCGCATGGAGATCACCGCGGGACTTCGCGCGCCGTCATACTGCACCAGCTTTAACCAGCGGGCACAGTCCAACAAGACGCTAACCATTAACACCCCTCTTACGGCGGGGTCGCAGGTCGTCGTCGCTCTCACTCGCCCGGTAGAAGTGATTGAGGTATTCGACCAGACCCTGGTAATACCCGATCCGTTTTACGTTACGTCGGTTACGCGCAACGGTAATAGCGGAATAACCCTGCGCGGGGATGATGCGTATGGCGCGTACTCTGGTTTACCACAATGGGCGGGCGTCATAATGGAAGTGCTGCCGGTTGGGTCGCGTAACGCTGGTTTACTGGTGGCAAACTCGACGGACTTCACCGCAATATCCAACGTGGCGAAGCTGATGACCTGCAGATACGCAAAGCGCGTGCGCGTCAACGGGAGTATGGCCTTGCCTGTTAGTGGTGTTCCGTTCGCCCGCTGGGATGACGGCAACGTATCAGTAGGCTTCGATGGCGGCAGTATTATCGTCCGCAACGCGTCCTACGGTGGCATCGACGATGTGGCGGCTTCGGTGGACATGGACCTTGTAATATTCAACAATACACCCCCCACTCCGGGGACTGGCATCACCATGACGAATAACCAGAATCAGGTCACGTTCTCGACGGTGAACAAGCCGTTCGTATATGACCGCACTATTAACATCGGAACGAGCGACCAGAATATTGGAAACAGCCTGATCCAGCTTTCATACACCGGCGCGCTGATTCAGAACAACGGGGGCTATAACCACGTTCGAATGAACGGGATACGCATGGCGGGTAATAATGTGCGCGTCGCTAAAAACCGCGTCATCGGCAACTACTCACGGCAGCAATTCCAGATGCCAGGTAAAAATATTGCCGTACCTACCCCGCTACTCGTCATCCCGAATATGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
62024f068344a1481b00bb216fca591b85bf519c7fc996537f9d6614d1d6eb7d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8610
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank