Protein

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Genbank accession
YP_009814899.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTKKVISGSKGGSAKPHTPKEMADNLISINKIKILLAVSDGECDPDFSLKNLYLDDVPVQNEDGSYNYQGVTAEFRPGTQTQSYIKGFTDSSSEITLQRVITNDNPYVISVTDKNLSALRIKMMIPQGVKVENDGDRVGISVTYRVDMAVDGGAYKTVLTDTISGKTTSGYDRSRRVDLPDFNDQVLVRVSRVTPDSTNSNVVDTIRLQSYANVIDAKFRYPLTGIVYVEFDSELFPNQIPTISVKKRWKLINVPSNYDTELREYSGTWDGTWKKAWSNNPAFVLYDLITNQRYGLDQKELGIAIDKWSIYEAAQYCDQKVPDGKGGTEPRYLCDVVIQNQVEAYQLVRDICSIFRGMSFWNGESLSIIIDRPRDPSYLFTNENVVNGDFSYTYASEKSMYTQCNVTFDDEQNMYKQDVEGVFDVEASMRFGYNPTSITAIGCTRRSEANRRGRWILKTNLRSTTVNFATGLEGMIPTIGDVIAIADNFWSSALTLSLSGRVAEVSGLQVFLNYKVDARAGDFIIVNRPDGKPVRRTISKVSSDGKTISINTGFGFDVMPDAVFAIERTDIALQQYVVTKITRGDDQEEFTYSITAVQYDPNKYDEIDYGVNIDDRPTSNVTPDQLEKPKNVKVSSYSRVVQGISVETMRVTWDKVPYASLYEMQWRKGDGDWNNTPQTSNKEIEVEGIYAGNYGVRVRAVSAQGSASVWSDIVNVSLKGKVGEPGAPVNMTASDDEVFGIRVKWGFAPDSGDTAYTELQQAPNGADGHPIEDQATLLTMVPYPQYDYWHSILPAGYVNWYRARTVDRIGNVSPWSEFVRGMASDDTSIITDHIKVDIEGSDGFKWLKENAIAANDKIHSSAEAAIENALANDADVRIQQVKNGKFRAQIKESLKLIASETEARVTQVSQLQAEVEGEMSAMNTELREVIANGDQALSQSIQDLKAQIGDDIQGQITQVQQAIATETEARVSADTALSARLGNNEAALNEKLDSWSNATSTGAMYGVKLGLRYNGKEYDAGLALSLVGSGTAVKSQLLVSADRFAVISNASSNSFALPFVVEGSQVFINSLFVKDGTITNAKIGSFLQSNNYVAGTSGWRIDKNGNFEINGSGGTGRMRITNNIVQIWDANNVLRVRMGLF
Physico‐chemical
properties
protein length:1141 AA
molecular weight: 126134,53630 Da
isoelectric point:4,95053
aromaticity:0,08940
hydropathy:-0,36354

Domains

Domains [InterPro]
DC_0014
STR
1–1141
DC_0014
IPR053171
Unmapped
2–877
IPR053171 IPR015406
IPR055385
ATT
92–217
IPR055385 IPR032876 IPR036116
IPR013783
STR
627–718
IPR013783
IPR003961
STR
627–716
IPR003961
YP_009814899.1
1 1141
Architecture
STR
ATT
STR
ATT
STR
STR 1-91 | ATT 92-217 | STR 218-339 | ATT 340-491 | STR 492-1141
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009814899.1
1 1141
Domain Start End Length (AA) Confidence
N-terminal 1 506 506 0,9183
Central domain 507 1082 577 0,0433
C-terminal 1083 1141 58 0,9080
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-506
Central
507-1082
C-terminal
1083-1141

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage CS01
[NCBI] 		2496544 Uroviricota > Caudoviricetes > Drexlerviridae > Kyungwonvirus CS01 >
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009814899.1 [NCBI]
Genbank nucleotide accession
NC_048088.1 [NCBI]
CDS location
range 116 -> 3541
strand -
CDS
ATGACGAAGAAAGTGATATCGGGCAGCAAGGGCGGCAGCGCGAAGCCGCATACTCCAAAAGAAATGGCTGACAACCTGATCTCGATCAACAAAATTAAAATCCTTCTCGCCGTTTCTGATGGCGAATGCGACCCTGATTTTTCTCTCAAAAATCTTTATCTTGATGACGTTCCGGTTCAAAACGAGGATGGCAGCTACAACTACCAGGGCGTCACCGCAGAGTTCAGGCCAGGCACGCAGACTCAGAGCTATATCAAGGGGTTCACAGATAGCTCAAGCGAGATCACATTGCAGCGAGTCATTACCAATGACAATCCTTACGTCATATCAGTTACCGACAAAAACCTTTCTGCGCTGAGAATCAAGATGATGATCCCGCAGGGCGTGAAGGTTGAAAATGACGGCGACCGAGTAGGCATCAGTGTTACTTATCGTGTTGATATGGCCGTTGACGGCGGGGCATATAAAACCGTTTTAACTGATACGATATCCGGGAAAACGACCAGCGGATATGACCGAAGCCGTCGCGTTGACTTACCGGACTTTAACGATCAGGTTTTGGTTCGCGTGTCTCGCGTGACGCCGGACAGCACAAATTCTAACGTTGTGGATACGATCCGCCTACAAAGCTACGCGAACGTTATCGACGCCAAATTCCGCTATCCTCTGACAGGTATTGTGTACGTCGAATTTGATTCCGAGCTGTTCCCTAATCAGATCCCAACCATATCTGTCAAGAAGCGCTGGAAGCTTATTAACGTGCCGAGCAATTATGACACGGAGTTGCGCGAGTATTCCGGCACTTGGGATGGAACATGGAAGAAGGCGTGGAGCAACAACCCGGCATTCGTGCTTTATGACCTGATAACCAATCAGCGCTATGGTCTCGATCAGAAAGAGCTTGGCATCGCCATTGATAAATGGAGCATTTACGAAGCGGCCCAATACTGCGATCAGAAAGTGCCTGACGGGAAAGGCGGAACGGAGCCGCGCTATCTGTGCGACGTGGTGATCCAGAATCAGGTAGAGGCTTACCAGCTTGTGCGCGATATTTGCTCTATCTTTCGCGGAATGAGTTTTTGGAACGGCGAGAGCTTGTCTATCATCATCGACAGGCCGCGCGATCCGTCTTACCTGTTTACGAATGAAAACGTTGTAAACGGAGATTTCAGTTACACCTACGCCAGCGAAAAGAGCATGTACACGCAGTGCAACGTCACCTTTGATGATGAGCAAAATATGTACAAACAGGATGTCGAAGGTGTTTTCGACGTTGAAGCATCCATGCGATTTGGTTACAACCCGACCAGCATTACAGCCATCGGTTGCACGCGCAGGAGCGAGGCTAACAGACGCGGGCGCTGGATACTAAAAACCAACCTTCGCAGCACGACAGTAAACTTTGCAACCGGACTTGAGGGCATGATACCGACAATTGGCGATGTTATCGCGATTGCGGACAACTTCTGGAGTAGCGCGCTTACACTTAGCCTTTCCGGGCGCGTGGCAGAGGTTAGCGGCTTGCAAGTTTTCCTGAACTATAAAGTTGATGCCCGAGCAGGTGACTTTATCATCGTCAACCGACCTGACGGTAAGCCTGTGCGCCGCACCATCTCAAAGGTGAGCAGCGACGGCAAAACCATAAGCATAAATACCGGGTTCGGTTTTGATGTTATGCCAGATGCTGTTTTTGCCATTGAGCGTACAGATATCGCGTTGCAGCAGTATGTGGTGACAAAAATCACTCGTGGCGATGACCAGGAGGAATTTACCTACAGCATAACGGCGGTTCAGTACGATCCGAACAAATACGACGAGATTGACTATGGCGTCAATATTGATGACCGGCCAACAAGTAACGTGACGCCAGATCAGCTTGAGAAACCGAAAAACGTTAAGGTTTCTTCATATTCTCGCGTAGTGCAGGGAATCAGCGTTGAAACCATGCGCGTAACCTGGGATAAGGTTCCATACGCCAGCCTTTATGAGATGCAATGGCGCAAAGGGGATGGTGACTGGAACAACACGCCGCAGACGTCCAACAAGGAAATAGAGGTAGAGGGTATCTATGCCGGCAACTACGGCGTAAGGGTTCGCGCTGTTTCAGCGCAGGGCAGCGCTTCCGTCTGGTCAGATATTGTGAACGTGTCGCTAAAAGGCAAAGTTGGAGAGCCTGGCGCGCCGGTCAACATGACGGCTTCTGATGATGAGGTTTTCGGCATCCGGGTTAAGTGGGGATTTGCGCCAGACTCCGGAGATACAGCTTACACCGAATTGCAGCAGGCACCGAACGGCGCAGATGGTCATCCTATTGAGGATCAGGCAACGCTGTTAACGATGGTTCCATATCCGCAATATGACTACTGGCATAGCATTCTCCCGGCTGGCTATGTTAACTGGTACAGGGCGCGAACTGTGGATCGCATAGGAAACGTGTCGCCGTGGAGTGAGTTCGTAAGGGGCATGGCGTCGGACGACACCAGCATCATAACGGATCACATTAAGGTTGATATCGAAGGTTCTGACGGCTTCAAATGGTTGAAGGAAAATGCGATTGCGGCCAATGACAAGATCCACTCATCGGCGGAGGCGGCCATTGAAAACGCCTTAGCTAATGATGCCGATGTTCGCATTCAGCAGGTTAAAAATGGTAAGTTCAGGGCGCAAATCAAAGAGAGCCTAAAACTCATCGCCAGCGAAACAGAGGCCCGCGTGACGCAGGTTTCACAATTGCAGGCGGAGGTTGAAGGAGAAATGTCGGCCATGAATACCGAACTGCGAGAGGTTATCGCAAACGGAGATCAGGCGCTCTCTCAATCCATCCAGGATCTGAAAGCGCAAATTGGCGACGATATCCAGGGTCAGATAACGCAGGTTCAGCAGGCGATAGCAACGGAAACCGAAGCCAGGGTTTCGGCAGATACCGCATTATCAGCGCGTCTTGGCAACAATGAGGCAGCGCTGAATGAGAAGCTTGATTCGTGGTCTAACGCAACCTCAACCGGCGCTATGTATGGCGTCAAGCTTGGTCTCCGGTATAACGGAAAAGAGTATGACGCCGGGCTTGCATTGTCGCTTGTGGGTTCTGGAACTGCGGTTAAATCGCAATTGCTGGTTAGCGCTGACCGGTTCGCCGTTATCAGCAATGCTTCGTCGAACTCTTTCGCGCTGCCGTTCGTTGTTGAGGGATCGCAGGTGTTTATTAACAGCCTTTTCGTTAAGGATGGAACAATAACAAACGCCAAAATAGGCTCGTTTTTGCAGTCAAATAACTATGTCGCAGGCACTAGCGGATGGAGAATTGACAAAAACGGAAACTTTGAGATTAACGGAAGCGGTGGAACTGGTAGAATGAGGATTACCAATAACATTGTGCAGATATGGGATGCAAACAACGTTCTGCGCGTAAGAATGGGGCTTTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
28f8b7fee1c294fb09848ae40d21253304d36f96f4de36ee1ad263be90ebedd2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7860
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Analysis and Characterisation of Bacteriophage CS01 Active against Cronobacter sakazakii Kim,G.-H., Kim,J. and Yoon,S.-S. 2019-05-28 — GenBank