Protein

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Genbank accession
XAO36037.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MARLTRPVSVFNSLMDITYPCSTNGGKAELLQVIPGRMSGGGILLWDASMPQSNHNGITILSPEAKWDGTLEGLKSYRKSGGTGNGCWVRPRKGTDLMASWAGVDTDGDWIADEPLMALCQIAHTQRRNIRIDSGAIIRCGFTTTISQQDKHRIMSQTSFVLRGLRNFSIYADQDVEVITDHPVHRERTVFFLEDCDKVTISGLKFNSDFSDYSFEPHSPYEHHINEHWLGVVAEACGTIEVRRCKFNAPQFAVKADCFNRTDGRWNDTVAVKDCFFQYATNYCFLSRKLRHYIFSDNEVRFNGRKWHTYGEACAPTTYTENQIITRNRFIDQIAGQSCITPGSYAKQVLISDNFCQRSNGIFVEIGSASNINILNNVSKSTGERIVHGSDKYAGTTHILLVSGAVDDEPAGGLSNILIQGNNFQGGGYALQEYNTGIPIRRGLDILNNHLVDCIPPACTNQSFKYIRVEGNYIQAPDDYPDMAIAGQHPIIKDNVLIGVRLRARDLGYTVVGLKVVGNTFTANSVSSKFPALIDYTELEDLEAYDNAAGIQASYDSFIVAPANCNKISFMKVGMVEGFLQTPAVVYGSKLQNQKAGAIVGNSSPGSAHACAAFVSTSSGGWGFINYVPA
Physico‐chemical
properties
protein length:630 AA
molecular weight: 69278,30370 Da
isoelectric point:6,35457
aromaticity:0,09683
hydropathy:-0,21571

Domains

Domains [InterPro]
DC_0317
STR
90–629
DC_0317
IPR012334
STR
124–408
IPR012334
IPR011050
STR
164–474
IPR011050
XAO36037.1
1 630
Architecture
STR
STR 90-629 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAO36037.1
1 630
Domain Start End Length (AA) Confidence
N-terminal 1 110 110 0,9890
Central domain 111 571 462 0,9737
C-terminal 572 630 58 0,9737
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-110
Central
111-571
C-terminal
572-630

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PSK8
[NCBI] 		3138290 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO36037.1 [NCBI]
Genbank nucleotide accession
PP541515.1 [NCBI]
CDS location
range 20013 -> 21905
strand +
CDS
ATGGCAAGATTAACTCGCCCTGTTAGTGTATTTAATAGTCTGATGGATATTACTTATCCATGCTCCACTAATGGTGGAAAAGCTGAACTACTACAGGTTATCCCAGGACGTATGTCTGGTGGTGGCATCCTACTTTGGGATGCTAGTATGCCTCAGTCAAATCATAATGGTATTACCATACTCAGCCCAGAAGCGAAGTGGGACGGCACACTAGAAGGACTTAAGTCTTATAGGAAGAGTGGAGGAACTGGCAATGGTTGCTGGGTTCGACCACGCAAAGGGACTGATCTGATGGCATCTTGGGCTGGTGTTGACACAGATGGTGACTGGATTGCAGATGAACCACTTATGGCGCTGTGTCAGATTGCACATACACAACGCCGTAATATACGCATAGATTCTGGGGCTATCATTCGTTGTGGTTTCACAACCACAATCTCCCAGCAAGATAAGCATCGTATTATGTCTCAAACATCTTTTGTATTACGTGGGTTAAGAAACTTCTCCATATATGCAGATCAAGATGTAGAAGTAATAACAGACCATCCTGTACACCGTGAGCGTACAGTATTCTTCTTAGAGGATTGCGATAAGGTTACAATCTCAGGTCTTAAGTTTAATTCTGACTTCAGCGATTACTCTTTTGAACCTCACAGCCCTTATGAGCACCACATCAATGAGCACTGGCTAGGCGTAGTGGCAGAGGCTTGTGGAACTATTGAGGTACGCAGATGTAAGTTCAATGCACCGCAGTTTGCTGTAAAGGCAGATTGTTTTAATAGAACAGACGGGCGATGGAATGACACAGTTGCAGTAAAAGATTGCTTCTTCCAGTATGCTACAAACTATTGCTTTTTATCACGTAAGTTACGACATTACATCTTCTCTGACAATGAAGTAAGATTTAATGGACGTAAGTGGCATACATACGGAGAGGCTTGTGCACCTACTACCTATACTGAGAATCAGATTATCACTCGTAACCGTTTCATAGATCAGATTGCTGGTCAAAGCTGTATAACCCCTGGTTCTTATGCTAAGCAAGTCCTTATTTCAGATAACTTCTGTCAACGTAGTAATGGTATCTTTGTTGAGATAGGCAGTGCTAGTAATATTAATATTCTTAACAACGTCTCCAAATCTACAGGCGAACGCATCGTCCACGGAAGCGATAAGTATGCAGGAACTACACACATCCTTCTAGTATCTGGGGCAGTTGATGATGAACCTGCTGGTGGGTTAAGTAATATCTTGATTCAAGGTAATAACTTCCAAGGTGGTGGTTATGCCTTACAAGAGTACAATACGGGTATCCCTATTCGTCGCGGGTTGGATATTCTTAATAACCACCTTGTAGATTGTATCCCACCAGCCTGCACTAACCAATCCTTTAAGTATATTCGGGTAGAAGGTAACTACATTCAAGCTCCCGATGATTACCCAGATATGGCTATTGCAGGGCAACACCCTATTATTAAGGATAATGTCCTTATCGGTGTGCGATTAAGGGCTAGAGACTTAGGTTATACTGTTGTAGGTTTAAAAGTAGTAGGTAATACTTTTACTGCAAATAGTGTATCATCTAAGTTCCCTGCGCTTATCGACTACACTGAGCTAGAAGACCTTGAAGCATATGACAACGCAGCAGGCATTCAGGCCTCTTATGACAGCTTTATAGTCGCACCTGCTAATTGTAATAAAATTAGCTTTATGAAAGTTGGTATGGTCGAAGGCTTTCTACAGACACCGGCAGTTGTCTATGGTAGTAAGTTGCAAAATCAGAAGGCAGGTGCTATTGTTGGCAATAGTTCACCTGGGTCTGCACATGCTTGTGCTGCATTCGTGAGCACTTCTAGTGGTGGTTGGGGTTTTATAAACTACGTTCCAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
78aa03e4e19453ef38adee14edd68a8228b481704d7359b8daadede17a5c5cd1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8015
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50