Protein

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Genbank accession
XYL02407.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MHEAQAVLILGYIEAYRASKSDFYLDRAKEAWEAYNSHLLGAYAVESKMQRLSHYPLSTDGVPSHGGFKDVVVSFTNGRGKIPAGSPTWGEYLDKAFQAYNGVLGRNTVDSDVYGGTDANPNWTTSGLSWWVEWYIAWDGNRYWANGSIADSGHTSAEFGTIQLQDKGVTGSHKVTYCVRLPQEQGGSVIPAGSPVIVNPINVVADNQAPELDGEEMWCDACYQLYTLTGEEKYYTAFKQSYNKLLNFSDINAYDKLFRKTTLIKAPFTDGTCLVAGTVPVMSRDSDGYINFRMNARQPCEIIQKGTTYKIGRDAEIVMNFGGEGVLFQPHFILNDGNNNKKQYRIGVPFGGSEVTETVAKVTDFVEVVGKDGNPYLLPKEENIAVSGGASVYSAV
Physico‐chemical
properties
protein length:396 AA
molecular weight: 43566,15960 Da
isoelectric point:5,18743
aromaticity:0,11869
hydropathy:-0,33333

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYL02407.1
1 396
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0972
Central domain 11 385 376 0,9594
C-terminal 386 396 10 0,2666
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-385
C-terminal
386-396

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage FV3
[NCBI] 		3433636 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYL02407.1 [NCBI]
Genbank nucleotide accession
PV685965 [NCBI]
CDS location
range 39325 -> 40515
strand -
CDS
ATGCATGAAGCTCAAGCTGTGTTGATTCTGGGATACATTGAAGCATACAGGGCATCGAAAAGCGATTTTTATCTAGATAGGGCCAAAGAAGCTTGGGAAGCCTACAACAGTCACCTTCTGGGTGCATATGCAGTAGAAAGTAAAATGCAAAGATTGTCCCACTACCCATTATCCACAGACGGGGTTCCATCACATGGTGGGTTTAAAGATGTAGTGGTGTCTTTTACCAACGGTAGAGGAAAAATCCCAGCTGGATCTCCGACATGGGGTGAATACCTAGACAAGGCATTCCAAGCGTATAACGGTGTGCTAGGAAGAAACACTGTAGACTCTGATGTTTACGGCGGCACAGATGCTAACCCAAATTGGACAACATCTGGATTGAGTTGGTGGGTTGAGTGGTATATAGCATGGGATGGTAACCGCTATTGGGCCAACGGTAGCATAGCCGACAGTGGTCATACGTCTGCAGAGTTCGGCACAATCCAACTGCAGGATAAGGGTGTTACAGGCAGCCACAAAGTAACCTACTGTGTGAGATTGCCACAAGAGCAGGGTGGATCGGTGATACCTGCTGGATCCCCTGTAATTGTAAACCCTATAAATGTGGTTGCAGACAATCAAGCCCCAGAGTTGGACGGGGAAGAAATGTGGTGTGACGCTTGTTATCAACTCTACACTTTGACAGGCGAGGAAAAGTATTACACAGCGTTTAAACAGTCTTACAACAAGTTGCTTAATTTCAGTGATATAAATGCCTACGACAAGTTGTTTAGAAAGACCACGTTGATTAAGGCACCGTTCACAGATGGTACTTGTCTCGTTGCAGGAACAGTTCCTGTCATGAGTAGGGACAGCGACGGGTATATCAATTTTAGAATGAACGCACGCCAGCCTTGCGAAATAATCCAAAAAGGGACTACATACAAGATAGGCAGAGATGCTGAAATTGTTATGAATTTCGGAGGAGAGGGGGTTCTGTTCCAGCCACATTTCATCCTTAATGATGGCAACAATAACAAAAAACAGTATAGGATAGGGGTCCCTTTTGGAGGGTCAGAAGTAACAGAGACAGTTGCCAAAGTTACTGATTTCGTAGAGGTGGTTGGTAAAGACGGTAACCCGTATCTCTTGCCAAAAGAGGAAAACATTGCCGTAAGCGGTGGTGCTAGTGTTTATAGTGCGGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4479093f6df2222d40b0e87f7ed346a3713cdd1aca5c6e4825f6bc0851afaf7f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8299
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50