Protein

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Genbank accession
AFC21999.1 [GenBank]
Protein name
portal protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTHSHITNLVARNIAQRGMMSLMGAIYNLVRQNGKKEITVETANGIVSLDPRKLPARNELIVSVAVGDGERKERAAALQSLMMAMQNPQMQQFMQPQNAYYMASQMFESMGIFDTENYITPLDKLPPPQPDPMQELTIQQMQEQIKQIGVQTQKLISDVTNETRKSEFEQQKAADEMQMKLQESRSLQAMNADKMSISERQLALEERKIELEAQKLELKRQEMLLEAQIEARQDRPVAIGSTGGRR
Physico‐chemical
properties
protein length:246 AA
molecular weight: 27993,90700 Da
isoelectric point:5,88076
aromaticity:0,03252
hydropathy:-0,61870

Domains

Domains [InterPro]
IPR056909
STR
7–143
IPR056909 Coil
AFC21999.1
1 246
Architecture
STR
STR 7-143 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_CsaP_GAP52
[NCBI] 		1141137 Uroviricota > Caudoviricetes > Grimontviridae > Crifsvirus GAP52 >
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFC21999.1 [NCBI]
Genbank nucleotide accession
JN882286 [NCBI]
CDS location
range 6411 -> 7151
strand +
CDS
TTGACCCATTCCCATATCACCAACTTGGTCGCTCGTAATATCGCACAACGTGGTATGATGAGTCTGATGGGTGCTATCTACAATCTTGTACGTCAAAATGGTAAGAAAGAAATTACTGTTGAGACTGCAAATGGTATTGTTTCTCTCGACCCTCGTAAGCTTCCTGCACGAAATGAGCTAATTGTATCTGTAGCGGTTGGTGATGGCGAACGTAAAGAACGTGCCGCAGCATTGCAATCTTTGATGATGGCTATGCAGAATCCACAAATGCAACAGTTCATGCAGCCGCAGAATGCTTATTACATGGCTTCTCAAATGTTTGAGAGCATGGGTATCTTTGATACTGAAAACTATATCACTCCTCTGGACAAACTGCCACCTCCTCAGCCTGACCCGATGCAGGAACTGACGATTCAGCAGATGCAAGAGCAGATTAAACAGATTGGTGTTCAGACTCAGAAACTCATTAGCGATGTAACTAACGAAACTCGTAAATCTGAATTCGAACAGCAGAAAGCCGCTGATGAAATGCAGATGAAACTTCAAGAGTCTCGCTCTCTCCAAGCGATGAACGCAGATAAAATGTCTATCTCCGAACGTCAACTTGCTCTGGAAGAACGTAAGATTGAACTTGAAGCTCAGAAGCTTGAACTCAAGCGTCAAGAGATGTTACTCGAAGCACAGATTGAAGCCCGTCAAGACCGTCCGGTTGCGATTGGCTCAACAGGTGGGAGACGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5ebcc1f27daa616611a5f9d4917ffde575dfb80eff9d5ce33ebaf50cb65783e6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8937
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50