Protein

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Genbank accession
QXO06200.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MAEIKTGILLRRNLKKHFVNDAKPTQGEIVLAIDTNEIGMLVNDEIQWTPIQGVVNTVAGKQGDVELNKKDVGLENVDNTADIDKPISNSTKLEFQRHYTAENPHNITKKTLGLENVDNTADIDKPISNLTQIELNKKISWDDARKQAGGKDPVFTDTTYTIKDGELSEFNFNSYYKNFIDTFNTNSRVLPSTQALTANGRIITLRRADGSSESIETQDTLYDDSELRALIEQAKIDLHINIQDNLESDSTKDALSANQGKVLKGIIDEIKKVINITDDDFKNLQDIINYIEENREKFDDLTIANIKGLQAALDSKLNRDDSTYVAPNSALLESHPASDFVLNTNYNAKLIEIQDSLNSINSQIKLFETQSGVDSKINQAIRDLNFTETIQSINEQIARLQGSLDGIDLDAITENLQKVQQDLTSKIEQLETNTSKKIEEFEVIINNFDMSEIQTNINNFKDQITQNINSIQGVVDSVSESLSNVENNVQTSLENKVSKDELAAEVKTINDNITRLSSIANEAKWQDNFYSKVERKRQSLWSIISISKDFFKGSYKKPNTYNYWEAKYKNLKYINDNFDSLETISNAPTYDVVTNQVIKLTFSDIAEASFLIGSPKNKIQIAKIIAVNANTKKAVFIYGYPSFMTDDLSKIMVTIEKDSSFGNYLSRANKTDPETFQKIVTTQEFDLPDDTDDYSYFEASYEISGNIITLTMPETVFLEFYGNMTAVETTVTGSGTSQVWSSTLKSTDYEGNKLFSNGVLIGKDLTGEILTIYDNKSTYINTLGEARTNYNDFQIIREEYEDIMYTRDFLPGTIGPGDDELEW
Physico‐chemical
properties
protein length:823 AA
molecular weight: 92774,97610 Da
isoelectric point:4,56704
aromaticity:0,08141
hydropathy:-0,52916

Domains

Domains [InterPro]
DC_0964
STR
21–541
DC_0964 DC_1597
IPR054500
STR
242–269
IPR054500 G3DSA:1.20.120.20
Coil
Unmapped
409–433
Coil
QXO06200.1
1 823
Architecture
STR
STR
STR 21-541 | STR 554-807 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CJLB-12
[NCBI] 		2780170 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXO06200.1 [NCBI]
Genbank nucleotide accession
MW074125.1 [NCBI]
CDS location
range 77450 -> 79921
strand +
CDS
ATGGCTGAAATAAAAACTGGTATTTTATTAAGACGTAATCTTAAAAAACATTTTGTAAATGACGCAAAACCAACACAAGGTGAAATCGTTCTTGCTATCGATACAAATGAAATTGGTATGCTTGTAAATGATGAAATACAATGGACTCCTATCCAAGGTGTTGTTAACACGGTTGCGGGTAAACAAGGTGACGTTGAATTAAACAAAAAAGACGTAGGTCTTGAAAACGTTGATAACACTGCTGACATTGACAAGCCAATTTCTAATTCTACAAAATTAGAATTTCAAAGACATTATACAGCTGAAAACCCACACAATATAACAAAGAAAACGCTTGGTTTAGAAAACGTTGATAACACTGCCGACATCGACAAGCCAATTTCTAACTTGACTCAAATTGAGTTAAATAAGAAAATTTCTTGGGATGATGCTAGAAAGCAAGCCGGTGGGAAAGACCCAGTTTTTACAGATACTACTTATACTATTAAAGATGGTGAACTTTCAGAATTTAACTTTAATTCATATTATAAGAATTTCATAGATACTTTTAATACTAATTCCAGAGTTTTACCAAGCACACAAGCTCTTACTGCCAATGGTAGAATAATAACCTTAAGAAGAGCTGACGGCTCGAGTGAAAGCATAGAAACGCAAGATACTTTATATGATGATTCTGAACTTAGAGCATTAATTGAACAAGCTAAAATAGATTTACATATAAACATACAAGATAATTTAGAATCAGATTCTACTAAAGATGCTTTAAGTGCTAATCAAGGTAAAGTTCTTAAAGGTATAATAGACGAAATAAAGAAAGTAATTAATATTACAGATGATGATTTTAAAAATCTTCAAGATATTATTAATTATATAGAAGAAAATCGCGAAAAATTTGATGATTTAACAATTGCTAATATCAAAGGCTTGCAAGCTGCTTTAGATTCTAAATTAAATAGGGATGATTCTACATATGTTGCACCAAATTCAGCATTATTAGAATCACACCCAGCTAGTGATTTTGTATTAAATACAAATTATAATGCTAAGTTAATAGAAATACAAGATTCTTTAAATTCTATTAATTCACAAATTAAATTATTTGAAACGCAATCAGGTGTAGATTCTAAAATAAACCAAGCAATCAGAGATTTAAATTTCACTGAAACTATACAGAGTATTAATGAACAAATCGCAAGATTACAAGGCTCTTTAGATGGTATTGATTTGGATGCTATAACAGAAAATCTCCAAAAAGTTCAACAAGATTTAACAAGCAAGATAGAACAATTAGAAACCAATACATCTAAAAAAATAGAAGAATTTGAAGTTATTATTAATAATTTTGATATGTCTGAAATACAAACTAATATTAATAATTTTAAAGATCAAATTACTCAAAATATCAATAGTATACAAGGTGTTGTTGATTCTGTTTCTGAATCATTATCAAACGTTGAAAATAATGTTCAAACCAGTTTAGAAAACAAAGTTTCAAAGGATGAGTTAGCTGCTGAGGTTAAAACTATTAATGATAACATTACTCGCTTATCAAGCATAGCAAATGAAGCAAAATGGCAAGATAATTTTTATAGTAAAGTTGAAAGAAAACGACAATCTTTATGGTCAATTATATCAATTTCAAAAGACTTTTTCAAAGGTTCATATAAAAAACCAAATACTTATAATTACTGGGAAGCAAAATATAAAAATCTTAAGTATATCAATGATAATTTTGATAGCTTAGAAACAATATCTAATGCACCTACATACGACGTTGTTACTAATCAGGTTATTAAATTAACTTTTAGTGATATTGCGGAAGCATCATTTTTAATTGGAAGTCCTAAGAATAAAATTCAAATAGCTAAAATTATAGCAGTAAATGCTAATACTAAAAAAGCTGTGTTTATATATGGGTACCCAAGTTTTATGACCGACGATTTGTCAAAAATTATGGTAACTATAGAAAAAGATTCAAGTTTTGGTAATTATCTATCAAGAGCTAATAAAACAGATCCAGAAACTTTTCAAAAAATTGTAACCACGCAAGAATTTGATTTACCTGACGATACTGATGATTATTCATATTTTGAAGCTAGTTATGAAATATCTGGAAATATAATAACATTGACTATGCCAGAAACTGTATTTTTAGAATTCTATGGTAATATGACAGCAGTAGAAACGACTGTTACAGGTTCTGGTACTTCTCAAGTTTGGTCATCAACTTTAAAATCTACAGATTATGAAGGTAATAAGCTATTCTCAAATGGTGTGTTGATAGGAAAAGATTTAACCGGAGAAATCTTAACTATATATGATAATAAATCTACATACATAAATACCTTGGGTGAAGCTAGAACCAATTATAATGATTTTCAAATAATACGCGAAGAATACGAAGATATTATGTATACAAGGGATTTTTTACCAGGAACTATAGGACCAGGGGATGATGAGTTAGAATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a407fa8b72c751ca7c3335202410af7c3af5703bb623f6628d2ef25153da7d1c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3142
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages are an effective tool to reduce Campylobacter contamination in foods Vikram,A., Woolston,J. and Sulakvelidze,A. 2017-11-23 — GenBank