Protein

View in Explore
Genbank accession
XLE98948.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALYREGKAAMAADGTVTGTGTKWQSSLSLIRPGATIMFLSSPIQMAVVNKVVSDTEIKAITTSGAVVAPTDYAILLSDSLTVDGLAQDVAETLRYYQSQETVIAEAVEFFKDFDFEALQNLANQVKADSEAAGASATAAAASESAAKTSETNAKASENAAKTSEVAVETARDQVQQIINDAGEKSTLVVLAQPDGVSKVYNGKAPLVQTLPKSIFSYLNDSDRATLLSTVGARVDCDYALKDSIADGVMTIILPRVKGRYVFGNSPATLPSGFYMIGEGCFRPYNPLTDSAFNDCGVVIEVAAGKTFPFYSNKRHVFRDIVFNGRDRTTYLLYSANSSEQFNGTRFEGCGIYNFAVGLGWSGYTGTLFATRCSVSGNGDGVRNLIDSNLVACVINANNRGVALTGGSNNNNFESCRNEWNTTDNYYAYESVENTIVGELCDRAGRGGVVAGKDGQWIVTGVNVRRCGANQAVGNDYSANFIIIDNGRLQIGNVRTGKGANDSGDGGTTSPSFNVSILGAGGGTLLISGSDMTGFVTSAINQKASTVSKSITGCLGVNDDVNVGMNQVVNGRRIIGPLSSGILAASAGATLSVTKTNILQGIYDTYITRAILIECRIGSSAQSDYIKIPVGVRRENNFYLDVITSGIVANSGRIGLSGTGVTVSLSISATDGTITVLLTSVDGLARTVNVSLLQSM
Physico‐chemical
properties
protein length:696 AA
molecular weight: 73071,02650 Da
isoelectric point:5,07876
aromaticity:0,07184
hydropathy:0,01106

Domains

Domains [InterPro]
DC_0313
STR
1–507
DC_0313 DC_0257
IPR012334
STR
236–512
IPR012334
XLE98948.1
1 696
Architecture
STR
RBD
STR 1-512 | RBD 516-694 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLE98948.1
1 696
Domain Start End Length (AA) Confidence
N-terminal 1 233 233 0,9860
Central domain 234 577 345 0,9916
C-terminal 578 696 118 0,9908
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-233
Central
234-577
C-terminal
578-696

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Snook
[NCBI] 		3374126 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLE98948.1 [NCBI]
Genbank nucleotide accession
PQ337356.1 [NCBI]
CDS location
range 20603 -> 22693
strand -
CDS
ATGGCACTATACAGAGAAGGCAAAGCGGCTATGGCCGCAGACGGAACCGTTACCGGGACTGGCACTAAATGGCAATCATCGCTTTCGCTGATTCGCCCCGGCGCGACGATTATGTTTTTGTCGTCACCAATTCAAATGGCCGTCGTAAACAAGGTGGTTAGCGATACTGAAATTAAAGCCATCACCACAAGCGGCGCTGTCGTAGCGCCTACTGATTACGCGATCCTGTTAAGCGACTCGCTGACCGTTGACGGACTAGCGCAAGATGTTGCGGAAACCCTGCGCTACTATCAGTCACAAGAAACCGTAATTGCGGAGGCGGTCGAGTTCTTTAAAGATTTTGATTTCGAAGCGCTTCAAAATCTTGCTAATCAGGTGAAAGCAGACTCTGAAGCTGCGGGCGCAAGCGCTACGGCTGCGGCTGCGTCTGAAAGCGCTGCAAAAACTTCAGAGACCAACGCCAAAGCATCTGAAAACGCGGCAAAAACTTCAGAGGTCGCAGTGGAGACTGCAAGGGATCAAGTTCAGCAGATCATCAATGATGCTGGCGAAAAGTCAACGCTGGTGGTTCTGGCTCAGCCCGACGGCGTAAGTAAAGTTTACAATGGCAAAGCACCTCTTGTTCAGACTCTACCTAAATCTATTTTTAGCTATCTAAATGATAGCGATCGAGCAACGCTACTTTCCACCGTTGGTGCGAGGGTTGATTGTGACTACGCTCTGAAAGATTCCATCGCGGATGGAGTAATGACGATTATCCTTCCAAGAGTGAAAGGCCGCTACGTTTTCGGGAATAGCCCTGCAACATTGCCTTCTGGTTTTTATATGATTGGTGAGGGTTGCTTTAGGCCATACAACCCACTGACAGACAGTGCATTTAACGATTGCGGTGTTGTGATTGAAGTAGCTGCCGGGAAAACGTTCCCCTTTTACTCCAACAAAAGACACGTTTTCAGGGATATTGTTTTTAACGGTAGAGATAGAACTACTTATCTGCTCTATTCCGCCAATTCATCAGAGCAATTTAACGGCACAAGATTCGAAGGTTGCGGCATATATAACTTTGCCGTTGGCCTTGGTTGGTCTGGTTACACCGGGACGTTGTTTGCCACTCGGTGCTCTGTGTCTGGAAATGGCGATGGTGTAAGAAACCTCATTGATTCCAATCTTGTTGCTTGTGTGATAAATGCAAACAACAGGGGCGTAGCACTAACAGGAGGGTCCAACAACAACAACTTCGAGTCTTGTCGCAATGAGTGGAACACAACAGACAATTATTATGCTTATGAGTCCGTGGAGAACACAATTGTTGGTGAGTTATGCGACCGAGCTGGGCGTGGCGGTGTAGTGGCTGGTAAAGATGGACAATGGATTGTAACCGGCGTTAACGTAAGGAGATGTGGCGCGAACCAGGCGGTTGGCAATGATTATTCTGCTAACTTCATAATCATTGATAATGGGAGGCTACAAATTGGAAACGTAAGAACAGGGAAAGGTGCAAACGATAGCGGAGATGGCGGGACGACATCGCCATCTTTCAACGTGTCAATCCTTGGGGCTGGAGGTGGAACACTTCTTATTTCAGGCTCTGACATGACTGGATTTGTGACATCTGCCATTAATCAAAAAGCATCGACGGTAAGTAAATCTATTACTGGGTGCCTTGGGGTTAATGACGATGTAAACGTGGGGATGAATCAGGTAGTTAATGGCAGACGTATAATAGGGCCACTTTCTTCAGGAATCCTTGCTGCATCTGCTGGCGCAACATTATCAGTCACCAAAACTAATATTTTGCAAGGGATATATGATACGTATATCACCAGAGCCATATTGATTGAGTGTAGGATTGGCAGTTCTGCGCAGAGTGATTATATAAAAATACCTGTAGGGGTAAGGCGCGAAAACAATTTCTATCTTGATGTCATCACCAGTGGAATTGTTGCAAACTCTGGAAGGATTGGCCTTTCTGGAACAGGGGTTACTGTTTCTTTGTCTATATCAGCAACAGATGGGACAATTACAGTATTACTTACCAGCGTGGATGGTTTGGCTAGAACGGTGAACGTTTCACTACTTCAATCTATGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
12b6bd14ec7a4f9ac5b77aba31505c8562a50c516b6dc1956fe0fed07f9ceb84
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7786
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Klebsiella phage Snook Mora,D.A., Lessor,L. and Gill,J.J. 2021-01-28 — GenBank