Protein

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Genbank accession
QPX64335.1 [GenBank]
Protein name
receptor binding protein 3
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNYSDKSITIKLISDLVINEFINIVNIHSPFLNIDFNGYSITLNNASYDIGFFMYNSILGDINKLKINCNNKSINTAVLLQNNSFCRFNDMKGILNCLGNAFVLSTNSEAYVSGSTCELSAGSSGYFSKGISSIGSKLLCHTCKFTQNSGALSQSVETSGIIDNHNTTFSGSITGKSQVVGTWTKNGYISA
Physico‐chemical
properties
protein length:191 AA
molecular weight: 20655,05870 Da
isoelectric point:7,57910
aromaticity:0,09948
hydropathy:0,03246

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPX64335.1
1 191
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0606
Central domain 11 180 171 0,8740
C-terminal 181 191 10 0,5928
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-180
C-terminal
181-191

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage F361
[NCBI] 		2794369 Uroviricota > Caudoviricetes > Connertonviridae > Fletchervirus CPX >
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPX64335.1 [NCBI]
Genbank nucleotide accession
MT863723 [NCBI]
CDS location
range 28379 -> 28954
strand -
CDS
ATGAATTATAGTGATAAAAGTATAACTATAAAATTAATTAGTGATTTAGTTATAAATGAATTTATTAATATTGTGAATATACATTCCCCATTTTTAAATATAGATTTTAATGGTTATTCTATTACATTAAATAATGCTTCCTATGATATTGGATTTTTTATGTATAATTCAATCTTAGGAGATATTAATAAATTAAAAATAAATTGTAATAATAAAAGTATCAATACAGCAGTTTTATTACAAAACAATTCATTCTGTCGTTTTAACGATATGAAAGGGATATTAAATTGTTTGGGTAACGCATTTGTTTTATCCACTAATTCAGAAGCTTATGTATCTGGTTCAACTTGTGAATTAAGTGCAGGTAGCAGTGGATACTTTTCAAAAGGAATATCATCTATAGGAAGCAAATTGTTATGTCATACTTGTAAATTTACTCAAAATTCAGGAGCGTTAAGCCAAAGTGTTGAAACTTCTGGAATAATAGATAATCATAATACAACATTTTCAGGAAGCATAACTGGTAAGTCTCAAGTTGTGGGTACTTGGACTAAAAATGGATATATTTCAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1ff2df54fc997ec57194744b38b19e042a2723f2fcf021e50d303a112673a9b4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7147
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50