Protein

View in Explore
Genbank accession
WBF81774.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MVNSMFGGDLDPYEKSLNYEYPYHPSGNPKHIDVSEIDNLTLADYGWSPDAVKAYMFGITVQNPDTGQPMGDEFYNHILERAVGKAERALDISILPDTQHEMRDYHETEFNSYMFVHAYRKPILQVENLQLQFNGRPIYKYPANWWKVEHLAGHVQLFPTALMQTGQSMSYDAVFNGYPQLAGVYPPSGATFAPQMIQLEYVSGMLPRKKAGRNKPWEMPPELEQLVIKYALKEIYQVWGNLIIGAGIANKTLEVDGITETIGTTQSAMYGGASAQIIQIDSDIKELIEGLRAYFGYNMIGL
Physico‐chemical
properties
protein length:302 AA
molecular weight: 34107,32570 Da
isoelectric point:5,01396
aromaticity:0,11921
hydropathy:-0,33013

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus virus vB_SurM-PSU5
[NCBI] 		3003796 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus ureilyticus
[NCBI] 		94138 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF81774.1 [NCBI]
Genbank nucleotide accession
OP913463.1 [NCBI]
CDS location
range 54052 -> 54960
strand +
CDS
ATGGTTAACTCAATGTTCGGAGGGGACTTAGACCCTTATGAGAAGTCATTAAACTATGAATACCCTTATCATCCATCAGGCAACCCTAAACACATAGATGTAAGTGAGATAGATAACTTAACATTAGCTGATTATGGGTGGTCACCAGATGCAGTTAAAGCTTATATGTTTGGTATCACAGTACAAAATCCTGATACAGGACAACCTATGGGTGATGAGTTTTATAACCACATATTGGAAAGAGCAGTAGGTAAAGCTGAGAGAGCTTTAGATATATCTATATTACCCGACACACAACATGAGATGAGAGATTATCATGAGACAGAATTTAATAGTTACATGTTTGTACATGCGTACAGAAAACCTATTTTACAAGTAGAAAACCTACAACTACAGTTTAATGGAAGACCTATATATAAATACCCTGCTAACTGGTGGAAAGTAGAGCACCTAGCAGGACACGTACAGTTATTCCCAACAGCACTAATGCAAACAGGGCAATCAATGTCATATGATGCTGTATTTAACGGATACCCTCAATTAGCAGGTGTATACCCGCCATCAGGAGCAACCTTTGCACCTCAGATGATACAGTTAGAATATGTATCCGGAATGTTGCCACGTAAAAAAGCAGGAAGAAATAAGCCATGGGAAATGCCCCCTGAATTAGAACAATTAGTTATAAAATACGCACTGAAAGAGATATACCAAGTATGGGGTAATCTAATTATTGGTGCCGGTATTGCTAATAAAACATTAGAAGTAGATGGCATTACAGAAACAATTGGTACTACGCAATCAGCTATGTATGGTGGGGCTAGTGCTCAAATTATACAAATTGACTCAGATATAAAAGAGTTAATAGAGGGATTAAGAGCTTATTTCGGATACAATATGATAGGATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f0c3ec07d5bba17cbb1ea9e5a5c15a74279ec09d4ee01d4cfa48ebdaa4b65d69
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7327
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Staphylococcus virus vB_SurM-PSU5 Kwon,H., Park,S.Y. and Kim,J.H. 2016-07-06 — GenBank