Protein

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Genbank accession
AGG91252.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,90
Protein sequence
MGVKLNPFTGKLDVVDSPSGDFSTVELNQGTQTSPSISFDGDPNTGIYSPGADQVAISTGGTGRIFVDADGQVGINSAPQFAFGLRVSPANGQTNALVSLVAGTNSATSRIDFGDSDSNDVGRIVYNHANNFFELRTNGSSGVFIDASGNIAFGTGGSVDDNTYIGHPTADAIAITTANNERARIDSSGRLLVGTSSSSTQGKVVIVGNSNSSTGEGELHLARGATPTSQQNLGNIHFGGVGLEKAAQIICKRDGGTWTSGSSHPSRLEFLTTADGASSPTERMRITSDGNVLIGKTSSDFTANGCEFSSTGGVFTRTAEALTINRQGSNGIAVVLRRSNVTVGSISVTTSATAYNTSSDYRLKENVVQLTGAADRLKQLKPSQFNFIADPDTTVDGFLAHEAQAVVPECVTGTKDAVDDDGNPVYQGIDQSKLVPLLTAALQEALAKIETLEQRLNDAGIA
Physico‐chemical
properties
protein length:462 AA
molecular weight: 47827,86600 Da
isoelectric point:4,77018
aromaticity:0,05628
hydropathy:-0,22424

Domains

Domains [InterPro]
DC_0680
STR
3–131
DC_0680 DC_1367
DC_0680
STR
102–247
DC_0680 IPR030392
IPR030392
CHP
359–411
IPR030392 Coil
AGG91252.1
1 462
Architecture
STR
RBD
STR 3-247 | RBD 248-462
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGG91252.1
1 462
Domain Start End Length (AA) Confidence
N-terminal 1 17 17 0,9230
Central domain 18 216 200 0,0695
C-terminal 217 462 245 0,9819
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-17
Central
18-216
C-terminal
217-462

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-RIP1
[NCBI] 		754041 Uroviricota > Caudoviricetes > Autographivirales > Kajamvirus SRIP1 >
Host Synechococcus sp. WH 8101
[NCBI] 		59932 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
11808890c4af623694a6ce574d689464ee83939ee90ea93cf958c9cdfbadd7e4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8105
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50