Protein

View in Explore
Genbank accession
QIG72161.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MENVKYLENGSIQADIDGQTVIIPDDMGNRYRQMVLEWESQGNEISPYIPPRPTSDQINAERERRISKGISIEVTGVGSIPITGTTQDTRNLQSLFSVATSRISTGDTTTITPFRDANNATQNLTPGQIVELFLKSTAYVSYFYDKSWTIKAMDPIPYNFADDEYWTD
Physico‐chemical
properties
protein length:168 AA
molecular weight: 18928,75240 Da
isoelectric point:4,47069
aromaticity:0,09524
hydropathy:-0,54286

Domains

Domains [InterPro]
DC_1488
ATT
1–54
DC_1488 IPR025484
QIG72161.1
1 168
Architecture
ATT
STR
ATT 1-54 | STR 55-152 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM2_3B
[NCBI] 		2509756 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG72161.1 [NCBI]
Genbank nucleotide accession
MN988523.1 [NCBI]
CDS location
range 174212 -> 174718
strand -
CDS
ATGGAAAATGTAAAATACTTAGAAAATGGGTCGATCCAAGCGGATATTGACGGTCAGACTGTAATTATTCCAGACGATATGGGAAATCGTTATCGTCAAATGGTTCTTGAGTGGGAGAGTCAAGGTAATGAGATTTCTCCTTACATTCCACCTAGACCTACCTCAGATCAAATTAATGCAGAACGTGAGAGACGTATTTCTAAAGGAATCTCGATTGAAGTAACTGGAGTAGGATCTATACCTATTACAGGTACAACACAAGATACCAGAAATCTTCAATCACTATTCTCAGTAGCTACAAGTAGGATCTCTACAGGTGACACAACAACAATTACACCTTTTAGAGACGCCAATAATGCAACCCAGAATCTTACTCCTGGTCAAATCGTTGAATTATTCTTAAAGTCCACTGCATATGTATCGTATTTTTACGACAAATCCTGGACGATTAAAGCAATGGATCCTATTCCTTATAATTTTGCAGACGATGAATACTGGACTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6373bebdd556686cff04d57ea1e725f2e010ace71759f0593edbedef2123125d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9514
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank