Protein

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Genbank accession
YP_009153089.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSDITANIVVSMPSQLFTMARSFKAVANGKIYIGKIDTDPVNPENQIQVYVENEDGSHVPVSQPIVINAAGYPVYNGQIAKFVTEQGHSMAVYDAYGSQQFYFQNVLKYDPDQLKQLLQSDEGAAHIGTNSGKNLQEELFAIKNLQEELFAIKNEIYQDPLTSWPFGGTLKIKQGVYDIASPLVLDYGNYDDRLPGSPGVRAHYEGENMAETIFNCQGTDFNLKMLGDTVGGTQRVHAYDYLGNITLKGSATSYGLLVTKKAYTKLENIVSYGHDNGEGLRTDSVLTSELDNVYLQSNRIGWRVLNSDGGSELNAITVNRLTASQNTQWGILGERWGAGTTINSLTCEGNGTQGDSDTGGMIINVNGLNGSCALVLNNPYFEANAGGSDLAINNTGTRPVTVVINGGNFHRGSSTAYTTYNILASSTGGGKLTVILNGTTFQSAGSYVPDASRPYWRELGNVEFIDIGCTFMEATSKAISISSGSIPRSGRINANGSVGIAPGVSSVNVVGTGVYDVTFSNPLAVAADCYVVQITPISAPNSVSCDVTYIGVDTFRVTLRDTLSGAGISSSFAFSITRLL
Physico‐chemical
properties
protein length:580 AA
molecular weight: 62006,39270 Da
isoelectric point:4,86050
aromaticity:0,08793
hydropathy:-0,13741

Domains

Domains [InterPro]
IPR009093
ATT
1–113
IPR009093 Coil DC_0499
IPR009093
ATT
1–105
IPR009093 DC_0983
IPR036730
ATT
2–111
IPR036730
G3DSA:2.170.14.10:FF:000001
Unmapped
2–110
G3DSA:2.170.14.10:FF:000001
IPR036730
ATT
7–109
IPR036730
YP_009153089.1
1 580
Architecture
ATT
STR
STR
ATT 1-113 | STR 114-205 | STR 303-577 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009153089.1
1 580
Domain Start End Length (AA) Confidence
N-terminal 1 152 152 0,9936
Central domain 153 478 327 0,9945
C-terminal 479 580 101 0,9633
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-152
Central
153-478
C-terminal
479-580

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage Sf101
[NCBI] 		1524881 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009153089.1 [NCBI]
Genbank nucleotide accession
NC_027398 [NCBI]
CDS location
range 14666 -> 16408
strand +
CDS
ATGTCAGATATCACCGCAAATATTGTGGTAAGCATGCCTTCGCAACTCTTCACTATGGCGCGTTCTTTTAAAGCCGTAGCCAATGGCAAAATTTATATCGGAAAAATTGACACTGACCCGGTAAATCCTGAAAACCAGATTCAGGTTTATGTAGAGAATGAAGACGGATCTCACGTCCCTGTTTCTCAGCCAATTGTTATCAATGCTGCCGGATATCCTGTGTACAACGGGCAGATTGCCAAATTTGTAACTGAGCAAGGCCATTCAATGGCTGTATATGATGCGTATGGTTCGCAGCAGTTCTATTTTCAGAATGTGCTGAAGTACGATCCTGATCAGTTAAAGCAGTTACTTCAATCAGATGAAGGAGCTGCTCACATTGGCACTAATAGCGGCAAAAATCTCCAAGAGGAGCTATTTGCAATAAAAAATCTCCAAGAGGAGCTATTTGCAATAAAAAATGAAATATATCAAGACCCGCTTACATCGTGGCCTTTCGGTGGAACATTAAAAATAAAGCAAGGGGTGTACGATATCGCGTCACCATTAGTGCTTGATTACGGCAACTATGACGACAGACTTCCCGGTTCTCCTGGTGTTCGTGCCCATTACGAAGGCGAGAACATGGCGGAAACCATCTTTAATTGTCAGGGTACGGATTTTAACCTCAAGATGCTAGGGGATACCGTTGGGGGGACCCAACGGGTGCATGCATACGATTATCTCGGGAATATTACGCTTAAAGGCTCCGCAACATCTTACGGTCTTCTCGTAACCAAGAAAGCATATACCAAGTTAGAGAACATAGTATCTTACGGGCATGACAACGGCGAAGGTTTACGTACAGATTCTGTATTAACTTCTGAATTGGATAATGTGTACCTACAGTCAAATCGTATTGGGTGGCGAGTGCTTAATTCTGATGGTGGGTCAGAACTTAATGCAATTACTGTCAACAGATTAACCGCAAGCCAGAATACACAATGGGGTATTCTTGGTGAGAGATGGGGTGCAGGGACTACCATCAATAGCCTTACATGTGAGGGTAACGGCACGCAGGGTGACTCTGACACTGGCGGCATGATTATTAACGTGAACGGTCTTAATGGATCATGTGCTTTGGTACTTAATAACCCATATTTTGAGGCCAACGCCGGCGGTTCTGACCTTGCCATTAATAACACAGGCACACGTCCAGTAACAGTAGTTATCAACGGTGGAAACTTCCATCGGGGTAGTAGTACAGCGTACACTACCTACAACATTTTAGCTAGTTCTACTGGTGGAGGGAAATTAACAGTCATTCTCAACGGGACGACATTCCAGAGTGCTGGTAGTTACGTGCCAGACGCATCGCGGCCATACTGGCGAGAGTTAGGTAATGTTGAGTTTATAGATATAGGTTGCACGTTCATGGAGGCAACAAGTAAAGCAATATCCATTTCCTCTGGCAGCATTCCACGTTCTGGAAGAATTAACGCCAATGGTAGTGTAGGCATCGCCCCGGGCGTGTCCTCGGTAAATGTGGTAGGTACAGGTGTTTATGATGTAACTTTTTCTAACCCGCTCGCAGTAGCCGCGGATTGTTATGTGGTGCAGATAACGCCAATATCAGCACCCAATTCTGTGAGTTGTGATGTTACTTATATTGGCGTAGATACATTTAGGGTGACCCTGCGCGATACGCTTAGCGGAGCAGGAATCTCCAGTTCGTTTGCATTTAGCATTACCAGACTACTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8ba7d97b2c996d6ef06651755de98872504e6feeb93cbd627ce1e822c8a5c066
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7923
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50