Protein

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Genbank accession
AUR84551.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSDINFCNTKEQLNHLGEVVTGKVNGSPTGSDIETSTLPYTGQVRKTLPALEGEYEKSIADKEAEADDVIDSYRLLNKGDYSSGITLESKFEFITYNGESYFATNPPYTTTETTPDVDGNLFIGNYITSDFGLVTSGTEVKHRRGTDAEIASGVPAIGELWFNTTDSSIHMGDGATQGGIKHLNVDLTNLVFDTVADMTTASPPVGSKVTIVERDNYTFEVVSGGSPDGKRVLDAGGGNTAVFVSVASFTAKAVGEAGGGAIVRGGKATVSDFPNRGPLLIMNNPSTVAAGECAGQQILIGDNPTGTPGAGDFIAQQVIMNNLNGRSSLWAQNILAVQDPSGSDGAVRCAEFEVAGTFGDANPDPFSPTNGPVFRKNGVELVGHGGSNGRLTSALTVWANDLTGDKWWREGISISRCATNGIQFYQNAGGSSEDINAFQNAAILDGSNSASVIKVDGFHTNAINFSTVNSLDNFVLLSNGAAQNLKIKSSADFDGGIDIDTGVSAIQNSNLIFSDRGSAKWYIQKNTAQALGIVDIAGGGITTIQFDGDVTNSVLINVNGTLKRITQGSNDSAGAGFAVLRVSN
Physico‐chemical
properties
protein length:584 AA
molecular weight: 61014,50100 Da
isoelectric point:4,52947
aromaticity:0,07363
hydropathy:-0,18545

Domains

Domains [InterPro]
DC_1405
STR
5–584
DC_1405
G3DSA:2.10.10.30
ATT
137–189
G3DSA:2.10.10.30
IPR041352
ATT
140–176
IPR041352
AUR84551.1
1 584
Architecture
STR
ATT
STR
STR 5-136 | ATT 137-189 | STR 190-584
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR84551.1
1 584
Domain Start End Length (AA) Confidence
N-terminal 1 319 319 0,7709
Central domain 320 518 200 0,4168
C-terminal 519 584 65 0,9956
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-319
Central
320-518
C-terminal
519-584

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.060.A._10N.261.48.B5
[NCBI] 		1881449 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus F11
[NCBI] 		1302862 Ascomycota > Sordariomycetes > Glomerellales > Plectosphaerellaceae > Sodiomyces >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR84551.1 [NCBI]
Genbank nucleotide accession
MG592438.1 [NCBI]
CDS location
range 20682 -> 22436
strand +
CDS
ATGTCTGATATAAATTTTTGTAACACGAAAGAACAACTCAACCACTTAGGAGAAGTTGTCACAGGTAAAGTTAACGGCTCACCGACGGGGTCTGATATCGAAACATCTACACTTCCTTACACCGGTCAAGTTCGCAAAACGCTCCCGGCTTTAGAGGGTGAGTATGAGAAATCAATTGCAGATAAAGAAGCTGAAGCAGATGATGTGATTGATTCTTACCGACTGTTGAATAAAGGAGATTACTCATCTGGAATTACTCTAGAGTCTAAATTTGAGTTCATTACCTACAATGGTGAGTCTTACTTTGCAACCAATCCGCCATACACCACAACTGAGACAACACCAGATGTTGATGGTAATTTGTTTATAGGTAATTACATAACATCCGATTTCGGTCTTGTAACGTCAGGGACTGAAGTGAAACACAGACGCGGTACGGATGCTGAAATCGCATCAGGTGTACCAGCTATCGGTGAACTGTGGTTCAATACTACAGACAGTAGTATTCACATGGGTGATGGTGCTACTCAAGGTGGTATTAAACATTTGAATGTGGATCTCACAAATCTAGTGTTCGACACTGTAGCTGACATGACCACGGCATCCCCGCCAGTAGGGAGCAAGGTAACTATAGTAGAAAGAGACAATTACACTTTCGAAGTTGTTTCTGGTGGATCGCCTGACGGAAAGAGAGTGCTAGATGCTGGCGGTGGCAATACTGCCGTATTCGTTAGCGTTGCTTCATTTACCGCAAAAGCAGTAGGGGAAGCTGGTGGTGGTGCAATTGTAAGAGGCGGCAAGGCTACAGTTTCTGATTTTCCTAATCGTGGCCCCCTGCTGATAATGAATAACCCTTCAACAGTAGCTGCTGGTGAGTGCGCAGGGCAGCAAATACTAATAGGCGACAACCCAACAGGAACACCCGGCGCTGGTGACTTTATTGCACAGCAAGTCATCATGAACAACCTTAATGGTAGATCTAGCTTGTGGGCGCAAAACATACTTGCAGTACAGGACCCTAGTGGTTCTGATGGCGCAGTTAGGTGTGCAGAGTTTGAGGTCGCTGGAACCTTCGGTGATGCCAATCCTGATCCATTTAGCCCAACCAATGGTCCTGTATTCAGAAAGAACGGTGTTGAATTGGTTGGCCATGGAGGAAGTAACGGAAGATTAACTTCGGCGCTTACTGTTTGGGCTAATGATTTGACTGGTGACAAATGGTGGAGAGAGGGTATATCCATTTCTAGATGCGCCACTAACGGTATACAGTTTTATCAAAATGCTGGTGGATCTAGTGAAGATATAAACGCATTCCAGAACGCCGCTATTCTTGATGGCTCTAACTCAGCAAGTGTAATAAAGGTCGATGGATTTCATACGAACGCTATTAACTTCTCTACTGTCAATTCGCTGGATAACTTTGTACTACTATCTAACGGGGCAGCGCAAAACCTTAAAATAAAAAGCTCTGCTGATTTTGATGGTGGAATAGACATCGACACCGGTGTAAGTGCCATTCAAAACTCCAACTTAATTTTTTCTGATCGAGGTTCTGCCAAATGGTATATTCAAAAAAACACAGCTCAAGCGCTTGGTATTGTTGACATCGCCGGTGGCGGTATAACAACAATTCAATTCGACGGTGATGTGACAAACTCAGTTCTTATTAATGTAAACGGTACATTGAAAAGAATCACGCAAGGCTCAAACGACAGTGCTGGTGCAGGTTTTGCTGTTTTAAGGGTCTCAAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6d77cbec9a71fbae8a705db65e8e22efbf323366836a2dc7cf8668e2093b9975
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6067
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank