Protein

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Genbank accession
WPK28661.1 [GenBank]
Protein name
long tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MEKFMAKFGQGYVQTPFLSESNSVRFKLSIAGSCPLSTSPAYIKFQDNPLGSQVFSVGLNVRVINPTTGAVVESKSYNFSTENDATSSAFVTFMDTYASNFIFALVTNAKTNFPPEVLTWFNKAGSSAIPLAQQVLNIVDLSYSAFYISGKNAIALEHIKYSNKKTSTDYSTPLDVVYDTIDDIGATGFPSRTYESTDTFLSAIGGTNNEIKRMPTTSLITPLAGYKLKPGDFLYMKFQLMADADLLAQGTTRLSIRFFKSPSTSPISFKDTNFDGAAGEWKIYEDYIEIPAGADGFTIYCYRTAPVGQGGLRNIIFTEVSCNGSVSKPAEFGVNGIRVNYVSESLSAPDIMTLPTQSSTDTGKVFGQEFKEASE
Physico‐chemical
properties
protein length:375 AA
molecular weight: 40837,47040 Da
isoelectric point:5,08438
aromaticity:0,12267
hydropathy:-0,11520

Domains

Domains [InterPro]
DC_0912
STR
1–375
DC_0912
PS52031
LEC
22–193
PS52031
IPR039477
STR
58–129
IPR039477
WPK28661.1
1 375
Architecture
STR
STR 1-375
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPK28661.1
1 375
Domain Start End Length (AA) Confidence
N-terminal 1 164 164 0,2889
Central domain 165 364 201 0,5238
C-terminal 365 375 10 0,6068
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-164
Central
165-364
C-terminal
365-375

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_EP32a
[NCBI] 		3090671 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK28661.1 [NCBI]
Genbank nucleotide accession
OR544954.1 [NCBI]
CDS location
range 28006 -> 29133
strand -
CDS
ATGGAAAAATTTATGGCTAAGTTTGGACAAGGATACGTCCAAACGCCGTTTTTATCGGAAAGCAATTCAGTACGATTTAAATTAAGCATAGCGGGCTCTTGTCCGCTATCAACATCTCCTGCTTATATTAAGTTCCAGGATAATCCACTCGGGTCCCAGGTTTTTTCCGTTGGATTAAACGTTCGTGTAATAAATCCTACAACAGGTGCAGTAGTTGAATCTAAGTCATATAATTTCTCTACTGAAAACGACGCCACGTCAAGTGCATTTGTTACTTTCATGGACACATATGCTTCAAATTTTATATTTGCTCTTGTTACTAACGCTAAAACAAACTTTCCACCCGAAGTTCTTACATGGTTTAATAAAGCCGGAAGTTCTGCTATTCCATTAGCTCAACAAGTTTTAAATATAGTGGACCTTTCTTATTCAGCATTTTATATTTCTGGTAAGAATGCTATAGCACTAGAACATATTAAGTATAGTAATAAGAAAACTTCAACCGACTATAGTACACCACTTGATGTTGTGTATGACACGATCGACGATATTGGTGCTACGGGCTTCCCTAGTCGTACGTATGAATCGACAGACACATTTTTATCTGCCATTGGAGGTACTAATAATGAAATTAAAAGGATGCCTACAACATCCCTTATTACACCTCTCGCCGGGTATAAATTGAAGCCTGGAGATTTCCTTTATATGAAATTCCAACTAATGGCTGACGCCGATTTGTTAGCACAAGGGACGACACGACTTTCTATTCGTTTCTTTAAATCTCCTTCTACTTCACCTATTTCATTTAAGGATACAAACTTTGATGGGGCTGCAGGTGAATGGAAGATATATGAAGACTACATAGAAATTCCTGCTGGTGCTGACGGGTTCACGATTTATTGTTATCGTACAGCTCCAGTCGGGCAAGGTGGATTAAGAAACATTATATTCACTGAAGTATCATGTAATGGAAGCGTTTCAAAACCTGCTGAGTTTGGTGTAAATGGTATTCGTGTAAATTATGTTTCGGAATCTTTAAGTGCCCCAGACATAATGACATTACCTACTCAATCTTCAACTGATACAGGTAAGGTATTTGGACAAGAATTTAAAGAAGCATCAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e98127fde7c20e1b2dd4f8aa5d524410611fa7116b7d8b229fcf19f18082e0c7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6982
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequencing of NWU_EP_32a Oluwarinde,B.O., Montso,P.K. and Ateba,C.N. 2024-10-22 — GenBank