Protein

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Genbank accession
YP_009190472.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MNILRSYTETVVTTPTDTFPISFEFDEKYDKVHVFLNKVAVEELGYVVTLANPTTLKIEPAIPSGTVRIERETDIDKMKYVFDAGALFIAQNVDSNFKQIVHSQQEVQDGFSKLRDDTLDTLEEFQEENFQELKEYVDGVFGMTNPNLFDGISDNMVITQNGDSQRVLNNRQNERINALEQKQGEVVEGKADKDYVDNELAKKADLTITDLLEVAKADKDYVDDKIAAIAGGLAASYETKAEADGAVSSGTIPAHSTVKVTNDPLSSNNGDWTWNGTALVKSDYDPLTQANQYTDNKTAEVKSDVMLDVSTVLNNALTLKATGDDHVFPVLVDESKNVLIGYDPNRDQIVAGGLQEQVFDKITDLKLGTSSTVIPVLTDSQGKVLIGYDTINDRAIAAGIDGNVTEVSGGTTFPVKKFAIKPLVTAVNHMLFYGQSLSVGAQGTPVLSTSQPYLNTTFEYGPRMDQDSTKVVPLVERVGSPASDGGANRGETMCSGAANYASVLMGNDGTIPDNHIIFASTAGHGGYSIDQLEKGTAWYNFFIKHVTEAKRLNAGQDYKVQVVCWVQGENDAVSSKQTTYDVYKAKLRQLQIDAEADIKAITGQTEPVRFITYQMTYASKTWWYMAKAQLDLCAEDDKFLMATPMYMFPYASDNIHLTALGYKWCSGYFGRAYKRYVQDGVVPEYIRPISATVKGRTVAVKFQVPRLPLKWDTNWLKPTTDYGFAVKDGNTQMGIVPNSLRISGDTVFMELTTTPTGKVKVRYALDYLGAGLNIQVAASGNLCDSTKDTMNINGTEYPLFHLAPHFELEAFVNKGV
Physico‐chemical
properties
protein length:816 AA
molecular weight: 89812,84360 Da
isoelectric point:4,82429
aromaticity:0,09191
hydropathy:-0,29951

Domains

Domains [InterPro]
DC_0363
ATT
53–128
DC_0363 DC_1069
SSF52266
STR
427–675
SSF52266
IPR036514
STR
430–682
IPR036514
IPR005181
ENZ
523–672
IPR005181
DC_0473
RBD
670–811
DC_0473
YP_009190472.1
1 816
Architecture
ATT
STR
RBD
ATT 53-128 | STR 152-705 | RBD 706-811 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009190472.1
1 816
Domain Start End Length (AA) Confidence
N-terminal 1 679 679 0,7374
Central domain 680 805 127 0,5329
C-terminal 806 816 10 0,6949
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-679
Central
680-805
C-terminal
806-816

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaP_PD-6A3
[NCBI] 		1701807 Uroviricota > Caudoviricetes > Autographivirales > Beijerinckvirinae > Friunavirus
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009190472.1 [NCBI]
Genbank nucleotide accession
NC_028684.1 [NCBI]
CDS location
range 14279 -> 16729
strand +
CDS
ATGAATATACTACGCTCATATACAGAAACAGTTGTGACTACACCCACCGATACCTTCCCTATCAGCTTTGAGTTTGATGAGAAGTATGATAAAGTTCACGTCTTTCTGAATAAAGTAGCTGTGGAAGAGTTAGGGTACGTTGTTACCCTAGCTAACCCTACAACTTTAAAAATTGAACCTGCTATTCCATCAGGCACTGTCCGTATAGAGCGTGAAACGGACATTGATAAAATGAAGTATGTTTTCGACGCAGGTGCGTTATTCATAGCGCAAAACGTAGATTCAAACTTCAAACAAATTGTACATTCTCAACAGGAAGTACAGGATGGTTTTAGTAAATTACGTGACGACACGTTAGATACGTTAGAAGAATTTCAGGAAGAAAACTTCCAAGAACTTAAGGAGTATGTAGATGGAGTATTCGGAATGACAAACCCAAACTTATTCGATGGTATTTCAGACAATATGGTAATCACTCAGAACGGTGATTCTCAACGAGTCTTAAACAACCGACAAAACGAGCGTATCAATGCGCTTGAACAAAAACAAGGTGAAGTGGTAGAAGGTAAGGCTGATAAGGATTATGTCGATAACGAGCTAGCTAAAAAAGCTGATCTTACTATTACGGACCTCTTAGAAGTTGCTAAAGCAGATAAGGATTACGTAGATGATAAGATCGCTGCTATAGCAGGTGGCTTGGCTGCTTCTTATGAAACTAAGGCTGAGGCTGATGGGGCTGTATCAAGTGGCACTATCCCTGCACATAGTACAGTTAAAGTTACTAACGATCCCTTATCAAGTAATAACGGTGATTGGACTTGGAATGGTACTGCTTTAGTTAAGTCAGACTATGACCCACTAACCCAAGCTAATCAATATACCGATAATAAAACTGCTGAGGTTAAATCAGATGTAATGCTTGATGTTAGTACAGTGTTGAATAATGCACTAACACTTAAAGCAACAGGTGATGACCATGTGTTTCCAGTATTAGTGGACGAATCTAAGAACGTACTCATCGGTTATGACCCTAACCGTGATCAGATCGTAGCAGGTGGTTTACAGGAACAAGTCTTCGATAAGATTACAGACCTTAAACTAGGTACAAGTTCAACCGTGATTCCAGTATTAACTGATTCACAAGGTAAGGTGCTTATCGGTTACGATACTATTAACGATCGTGCTATTGCTGCTGGTATCGACGGTAACGTTACTGAGGTATCTGGAGGCACTACATTCCCTGTTAAGAAGTTCGCAATTAAACCTCTAGTCACTGCTGTAAACCACATGTTATTCTATGGTCAATCATTGTCTGTAGGCGCACAAGGTACTCCTGTACTAAGCACATCACAACCTTATTTAAATACTACATTCGAATATGGTCCACGTATGGATCAGGACAGTACTAAAGTAGTTCCATTAGTTGAGCGTGTAGGTTCCCCTGCATCTGATGGTGGTGCTAACCGAGGTGAGACTATGTGTTCTGGTGCTGCTAACTATGCCAGTGTATTAATGGGTAATGATGGTACTATTCCTGATAATCATATCATCTTTGCGAGTACAGCAGGTCACGGTGGATATAGTATTGATCAACTCGAAAAGGGGACAGCATGGTATAACTTCTTCATCAAGCACGTAACCGAGGCTAAGCGCCTTAACGCAGGTCAAGACTACAAAGTACAGGTTGTATGTTGGGTTCAAGGTGAGAACGATGCTGTATCAAGTAAACAAACTACCTATGATGTTTATAAAGCTAAGTTACGTCAATTACAGATTGATGCAGAGGCTGACATTAAAGCTATCACAGGTCAGACCGAACCTGTTCGTTTCATCACATACCAAATGACTTACGCTTCTAAGACTTGGTGGTACATGGCTAAAGCACAGTTAGATTTATGTGCTGAGGATGATAAGTTTTTGATGGCTACACCTATGTATATGTTCCCATACGCATCGGATAACATCCACTTAACCGCATTAGGTTATAAGTGGTGTAGTGGTTATTTCGGACGCGCTTACAAACGGTATGTTCAAGATGGTGTTGTACCTGAATATATTCGCCCTATTAGTGCTACTGTTAAAGGTCGTACCGTTGCGGTTAAATTCCAAGTACCTCGTTTACCACTTAAATGGGACACTAACTGGCTTAAACCAACTACTGATTATGGCTTCGCGGTTAAGGACGGTAATACTCAGATGGGTATTGTACCTAACAGTCTACGTATTTCAGGTGATACTGTCTTCATGGAATTAACAACTACACCTACTGGTAAAGTTAAAGTGCGTTATGCATTAGACTATTTAGGTGCAGGGTTAAATATCCAAGTAGCTGCATCAGGTAACTTATGCGATAGCACCAAAGACACTATGAACATTAATGGTACAGAGTACCCACTATTCCACTTAGCCCCTCACTTTGAGTTAGAGGCATTTGTAAATAAAGGAGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
89a28f5c04903d5af8a4fc80219545cfa419d84a7449cab1677b22c1b70e5f76
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7583
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of an extensively-drug resistant Acinetobacter baumannii bacteriophage with broad host range Liu,Y., Guo,X., Tang,J., Liu,F., Fan,H., Yan,Y., Xu,Y. and Shi,Y. 2005-03 — GenBank