Protein

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Genbank accession
YP_010676028.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,81
Protein sequence
MLLLAANNAKSVLAAGIAATDLSLTVAPGAASLFPVPVSGTSYFMLTIVDALTGTQREVVQVTGVSGSTFTIVRAQEGTTARAWSGNDIVANLFTAGTFNRVAQIDSSGVLNNVTGIGELDTPVDTASGGTGVDNIDDIPDALNLVPFKGLPKDTFLFANFRSQNDVGVYFSTSNNGYQFATLSDSQMKINGSSDTVGGRDPSQLWIDGRLSMGVTAYVIGTYDTTIYRTTDGKNYTRNLVNFGSSPIGSATTPAPGATHACNQIWGPYLFMDGDTLYCGITLPYGADFVDINGNTIPDFRQYIATCTNIETLTFSTPVLITQTGNTQCQIDGVYYKIGSTWHLFTKNDYNKNIEHWTSSTLMGPYTKATNNPITAVQCEAPCLVQRQSSLPKYILYADDYVNASYVYTESADLVTWTAPTNIGTDRTTRHGSVINTSTLDKASQTVIAGMMQPRVPYTFRPQLISATNATFSPRDGWTYYITGTSQYTLTITELGAMSFKILIASQSAQAQVTIAVSTYFDGLPGNQPLILNGAQNGNKVVTFYKLNNKYVCDAPNATSSQLIQLSTITGFPTITQLVPIPGALYGTNGTSTYSSTTTISDVSPNFPDGTNFYLQVRSVTTSPANGTIQLSSSANVNVPSAGVTITPSALRVYEVRKMGGQWQLMT
Physico‐chemical
properties
protein length:667 AA
molecular weight: 71395,14460 Da
isoelectric point:5,01322
aromaticity:0,09595
hydropathy:-0,05802

Domains

Domains [InterPro]
DC_1952
STR
1–371
DC_1952
IPR023296
STR
166–450
IPR023296
IPR023296
STR
198–437
IPR023296
YP_010676028.1
1 667
Architecture
STR
STR 1-450 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010676028.1
1 667
Domain Start End Length (AA) Confidence
N-terminal 1 432 432 0,3488
Central domain 433 631 200 0,0840
C-terminal 632 667 35 0,9963
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-432
Central
433-631
C-terminal
632-667

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage PdC23
[NCBI] 		2894356 Uroviricota > Caudoviricetes > Felixviridae > Certevirus C23 >
Host Pantoea dispersa
[NCBI] 		59814 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010676028.1 [NCBI]
Genbank nucleotide accession
NC_071008 [NCBI]
CDS location
range 20046 -> 22049
strand +
CDS
ATGTTATTACTGGCGGCAAATAATGCTAAATCAGTGCTCGCGGCTGGAATTGCAGCTACAGACCTTTCGTTGACCGTTGCCCCCGGGGCGGCATCGTTGTTCCCTGTTCCGGTTTCAGGTACCAGTTATTTCATGCTGACTATCGTTGATGCTCTGACAGGCACTCAGCGTGAAGTTGTACAGGTCACAGGGGTGAGTGGATCAACATTTACCATTGTCCGTGCTCAGGAAGGTACGACAGCGCGTGCATGGTCAGGCAATGATATCGTTGCCAACCTCTTCACGGCTGGTACGTTTAACCGCGTGGCGCAGATTGACTCCTCAGGCGTGCTGAATAACGTCACAGGCATCGGTGAACTTGATACGCCGGTTGATACCGCAAGCGGCGGGACAGGTGTAGATAATATTGATGATATCCCCGATGCGCTTAACCTGGTTCCTTTTAAGGGTTTGCCGAAAGACACGTTTTTATTTGCTAACTTCCGATCTCAAAATGACGTGGGGGTTTATTTCTCAACGTCAAATAACGGTTACCAGTTTGCGACTTTGTCAGATTCGCAGATGAAAATAAACGGTTCAAGTGACACCGTCGGAGGCAGGGATCCGTCCCAGTTGTGGATAGACGGACGCTTATCTATGGGGGTGACCGCCTATGTGATCGGCACCTACGACACAACAATTTATCGCACAACTGACGGTAAAAACTATACGCGAAACCTGGTAAATTTTGGTAGCTCACCTATCGGTTCAGCAACTACTCCTGCGCCTGGCGCAACGCACGCATGCAATCAGATCTGGGGCCCATACCTGTTTATGGATGGGGATACGCTGTATTGTGGCATTACTCTGCCATATGGGGCTGACTTCGTCGATATTAACGGTAATACCATACCGGATTTCCGCCAGTATATTGCAACATGCACCAACATCGAAACGCTGACGTTTAGCACCCCTGTGCTGATCACGCAAACCGGAAACACACAGTGTCAGATAGACGGTGTATATTACAAAATTGGCAGTACATGGCATCTTTTCACTAAGAATGACTACAACAAAAATATCGAGCACTGGACATCCAGCACGTTGATGGGGCCCTATACTAAGGCGACTAACAACCCTATCACGGCCGTGCAATGCGAAGCCCCATGCTTAGTGCAGCGTCAGAGCTCACTCCCTAAGTACATCCTTTACGCCGATGATTATGTGAACGCGTCCTACGTTTACACCGAGTCGGCCGACCTGGTGACGTGGACTGCGCCTACAAATATAGGCACCGATCGCACAACCCGCCACGGAAGCGTGATCAATACGTCTACTCTGGACAAAGCATCACAGACAGTCATTGCCGGAATGATGCAGCCGCGCGTACCTTACACTTTCAGACCCCAGCTTATTAGTGCCACAAATGCGACGTTTTCTCCGCGTGACGGCTGGACATATTACATAACGGGCACATCGCAATACACGCTGACCATCACCGAACTTGGTGCAATGTCGTTTAAAATTTTAATTGCCTCTCAGTCTGCGCAGGCCCAGGTGACGATCGCAGTCAGCACGTATTTTGACGGGCTGCCAGGTAATCAGCCGTTGATTTTAAATGGTGCGCAGAACGGTAACAAAGTTGTGACGTTTTATAAACTGAACAATAAATATGTTTGCGATGCACCTAATGCGACAAGCAGTCAACTGATCCAGTTGAGTACGATAACTGGGTTTCCCACCATTACTCAGCTTGTACCTATACCGGGCGCATTGTATGGGACAAATGGAACATCTACTTATTCCAGCACTACGACCATTAGTGACGTATCTCCCAACTTTCCTGACGGGACAAACTTTTATTTGCAGGTGCGCAGTGTAACGACAAGCCCTGCAAACGGAACAATTCAGCTTTCATCCAGTGCTAACGTTAACGTGCCGTCTGCGGGTGTGACAATTACACCAAGCGCCCTCAGGGTATATGAGGTGCGCAAGATGGGCGGGCAGTGGCAACTTATGACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b1e0ad1082003fdc92f2c5d20e59caaa64cdb84b4d1701b1981264b16763e00f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7569
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50