Protein

View in Explore
Genbank accession
YP_009820026.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,64
Protein sequence
MANTTLTQFPAGQTQYKINFDYLARPFVVVTLVNSNDAALNRVLTAGNDYRFLNPTTIEILASQTGFDILQIHRFTSTDLLVEFRDGSVLTATDLTNAELQAIHIAEEGRDQTTGLAKQYADQAVEAGKDAQDILNQIIQLGKNGYTPVGSFENGGTVRLQNDVLQYGSGTSTTHWRWEGALPKVVPAGSTPTSAGGIGKGKWIDVTDATLRGQLAGTGGASMVKASDGRTVEQWLVQSDSASYRAKNMAKLAWVDYQVHNRGSIKSCFLGDSMTAGFDRTSTDVIPPQDGDWATRASMNYPYRFAGYLAEQSGCTSTVVMRAISGHTAKQAYEQAEWQTNPNCDIVFMMYAINDSGGVAGATLDIYMEYMEKLIRRYIDWGCAVVVQRPSGGGQGAGNPRWLHWAKRLQMVARVYGCPIFDAHEVMLYRHYAAVQSDGTHYNSMGYAIHGEKLASMLMAGGLLDTYRPVVNEITVWTGMMSDRVGWCDAMGNIGAFRSDGAFTRSKITGRLPGSTRVVTTFSFYLDAEAAHIYGKFLGKMNVIMTNSRWWNNNAQPYYQYAYDQSHSFGMSLERTPKSPNDFSGASGSRKFIGRVIGRGWHTLTFFKALDGTDDTESFINSLTIQPIPLGLSTEQMWGQDEERRYKVVHSRKLPSPSGKGNNLPQATVLNSFHMRVPQSVLGTGPGALCLPTPYFYNTVPAILRITDEKGTYIEFLVYKNGSSGLTWTGKVLKSTLAEASYPTLTAQLATAKQSVVRAAGQDGTNMPLENIYDFNGGLQPQNSSASDISWKGGIYFQFTLTWPGTAPTGYWNIELEGSDWFGNSESSFGAF
Physico‐chemical
properties
protein length:832 AA
molecular weight: 91315,52040 Da
isoelectric point:6,45131
aromaticity:0,10938
hydropathy:-0,29603

Domains

Domains [InterPro]
IPR005604
ATT
12–115
IPR005604 G3DSA:2.10.10.80 IPR036514
DC_0018
ATT
36–350
DC_0018 DC_0640
IPR040775
RBD
150–208
IPR040775 IPR013830
SSF52266
STR
269–458
SSF52266
cd00229
ENZ
269–456
cd00229
YP_009820026.1
1 832
Architecture
ATT
STR
RBD
ATT 12-350 | STR 351-459 | RBD 460-829 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009820026.1
1 832
Domain Start End Length (AA) Confidence
N-terminal 1 242 242 0,9966
Central domain 243 499 258 0,6393
C-terminal 500 832 332 0,4057
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-242
Central
243-499
C-terminal
500-832

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage GW1
[NCBI] 		2200756 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Kayfunavirus
Host Cronobacter turicensis
[NCBI] 		413502 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009820026.1 [NCBI]
Genbank nucleotide accession
NC_048161.1 [NCBI]
CDS location
range 3785 -> 6283
strand +
CDS
ATGGCTAACACCACTTTGACTCAGTTCCCTGCTGGTCAGACTCAATATAAGATTAACTTCGACTATCTGGCGCGACCGTTCGTAGTGGTGACTTTAGTCAACAGTAACGATGCGGCTCTTAACCGAGTCCTGACCGCTGGTAATGACTATCGGTTCCTTAACCCGACCACTATCGAAATCCTCGCGTCTCAGACCGGGTTCGACATCCTCCAGATTCACCGCTTCACGTCTACAGACCTTCTGGTCGAGTTCCGTGACGGTTCGGTCCTGACTGCTACTGACCTGACTAACGCTGAGCTTCAAGCAATCCACATTGCAGAAGAAGGCCGCGACCAGACTACAGGTCTCGCCAAGCAGTATGCTGACCAAGCAGTAGAAGCTGGTAAGGACGCTCAGGACATCCTGAACCAGATTATCCAGTTAGGTAAGAACGGCTACACTCCTGTGGGTTCCTTCGAGAACGGTGGGACTGTACGTCTTCAGAATGACGTCCTCCAGTACGGGTCCGGCACTTCCACGACTCACTGGCGCTGGGAAGGTGCTCTGCCTAAAGTCGTTCCCGCTGGCTCAACCCCAACGTCTGCTGGCGGCATCGGCAAGGGTAAATGGATTGACGTAACTGATGCGACTTTGCGTGGACAACTGGCTGGGACTGGCGGTGCCTCTATGGTTAAAGCGTCCGATGGTCGTACCGTTGAGCAGTGGCTCGTTCAGTCTGACTCTGCATCTTACCGTGCGAAGAACATGGCTAAGCTGGCGTGGGTAGACTATCAGGTCCACAACCGTGGGTCCATCAAATCCTGCTTCTTGGGAGACTCAATGACTGCTGGTTTCGACCGGACGTCCACTGACGTTATACCACCTCAGGATGGAGACTGGGCGACCCGTGCGTCTATGAACTACCCGTACCGCTTTGCAGGCTACCTCGCTGAGCAGTCCGGCTGCACATCAACGGTTGTTATGCGAGCAATCTCAGGACATACCGCTAAGCAGGCTTACGAGCAGGCAGAGTGGCAGACAAACCCGAACTGTGACATCGTGTTTATGATGTACGCGATTAACGACTCGGGTGGTGTTGCTGGTGCTACTCTTGACATTTACATGGAGTACATGGAGAAGCTCATTCGTCGCTATATTGATTGGGGATGTGCTGTAGTGGTTCAGCGTCCGTCAGGCGGCGGTCAGGGTGCTGGGAACCCACGTTGGCTTCACTGGGCTAAGCGTTTACAGATGGTTGCCCGTGTCTACGGCTGTCCAATCTTCGATGCGCATGAGGTAATGCTGTATCGTCACTACGCTGCTGTACAGTCTGACGGGACTCACTACAACTCTATGGGATACGCGATTCATGGAGAGAAACTGGCGTCCATGCTCATGGCTGGTGGTCTTCTTGATACCTACCGTCCGGTGGTGAATGAGATTACCGTGTGGACCGGGATGATGTCAGACCGTGTAGGCTGGTGTGACGCTATGGGTAACATTGGGGCCTTCCGTTCTGATGGTGCGTTTACCCGTTCTAAGATAACTGGTCGTCTTCCGGGAAGCACACGAGTGGTCACGACCTTCAGTTTCTATCTTGACGCGGAGGCTGCGCACATCTACGGTAAGTTTCTCGGTAAGATGAATGTCATCATGACCAATAGTCGCTGGTGGAACAACAACGCTCAGCCGTACTACCAGTACGCTTACGACCAGTCACACTCCTTTGGCATGTCTCTGGAGCGAACCCCTAAGTCCCCTAACGACTTTTCAGGTGCTTCTGGTTCCCGCAAGTTCATCGGTCGAGTCATTGGGCGTGGTTGGCATACTCTGACGTTCTTCAAAGCTCTGGATGGGACGGATGATACCGAGTCATTCATTAACAGCCTGACAATCCAACCAATCCCGCTTGGGCTGTCAACCGAGCAGATGTGGGGACAAGACGAGGAGAGGAGATATAAGGTAGTGCATAGTCGTAAGCTGCCAAGTCCTTCCGGTAAGGGTAACAACCTACCTCAGGCTACCGTACTGAATAGCTTCCATATGCGAGTGCCTCAAAGTGTTCTTGGTACGGGTCCGGGGGCGCTCTGTCTTCCAACTCCATACTTCTACAACACTGTTCCTGCTATCCTTCGAATCACAGACGAGAAGGGAACGTACATTGAGTTCCTAGTTTACAAGAACGGTTCGTCTGGCCTGACTTGGACTGGTAAGGTGCTGAAGTCAACGCTGGCGGAAGCCTCCTATCCTACCCTTACAGCTCAGCTCGCAACGGCTAAGCAGTCTGTGGTCAGGGCTGCTGGTCAGGATGGTACGAATATGCCTCTGGAGAATATCTATGACTTCAATGGAGGACTTCAGCCTCAGAACAGCTCAGCGTCTGACATTTCGTGGAAAGGTGGTATCTACTTCCAGTTCACCCTTACGTGGCCGGGCACTGCGCCTACGGGCTACTGGAACATTGAGCTGGAAGGCTCTGACTGGTTCGGTAACTCTGAGTCTTCTTTCGGTGCTTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
23a71ae78e6282a67f5bac9cae086c6dc8541f85930fe75c7092dd11ecee19dd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6251
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome analysis of a novel phage GW1 lysing Cronobacter Zeng,H., He,W., Li,C., Zhang,J., Ling,N., Ding,Y., Xue,L., Chen,M., Wu,H. and Wu,Q. 2019 30426215 GenBank