Protein

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Genbank accession
XPK43691.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSDLYFPRSLKPIVSKGYSMTRRNNVWSVDLAGGGVRQGRDTYYDVFPISVTLITSALGRQAFLSFLEKVDGGASSFWMAHDFGMGIQDYQVTITSTIAESTEDGINWTITFTATAEKSPFQDLENQCLINNLPDLYGCYGDCLGSFLKIYANYETTFPRIWSNEGPAGYPPINMLASTLDSRIVYDGPQVYYINRNGNLVQSAANEWPLTFIDGVAVGRVPPEKAATNVVEHSNNLLSTSFSRARTTTTASSLTLFQETYAAKLTATSVSGNHYINQAESPEQETRYSISAIIKADEYQSSAVVIGNRNALDNFQYAYVDLASGYLISGDTSRSFVSNLGGGWYHVSMSADTNDSGGLIYSQINMLSPSNSLTFTGDDVSGFITALIQMEPSEFASSPIVTEESPVTRPTASAKVAMNGATSIDITYSDGSVVNVLAADDYATIPQADSAWGSKYITRIDFNVDG
Physico‐chemical
properties
protein length:466 AA
molecular weight: 50625,53020 Da
isoelectric point:4,48030
aromaticity:0,10944
hydropathy:-0,15558

Domains

Domains [InterPro]
DC_0353
STR
48–466
DC_0353
NF048003
Unmapped
224–410
NF048003
XPK43691.1
1 466
Architecture
STR
STR 48-466
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage VerenaMeyer_Bas76
[NCBI] 		3398439 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK43691.1 [NCBI]
Genbank nucleotide accession
PQ850632.1 [NCBI]
CDS location
range 17162 -> 18562
strand +
CDS
ATGAGCGACTTATATTTCCCACGTAGCCTTAAGCCAATTGTATCGAAAGGCTACTCAATGACCAGACGTAACAACGTCTGGAGTGTAGATTTAGCCGGTGGCGGAGTGCGTCAAGGCCGTGACACGTATTATGATGTGTTCCCAATAAGCGTAACCCTGATTACATCGGCACTGGGACGGCAGGCGTTTCTGTCGTTCCTCGAAAAAGTAGACGGCGGTGCGTCAAGTTTCTGGATGGCGCACGACTTCGGCATGGGTATTCAGGATTACCAGGTAACAATCACGTCAACCATCGCAGAGTCCACCGAAGATGGTATTAACTGGACAATTACTTTCACGGCAACCGCCGAGAAATCGCCGTTCCAGGACCTTGAGAACCAGTGCCTGATTAACAATCTGCCAGATTTGTACGGCTGTTACGGGGATTGTCTGGGTAGTTTCCTGAAAATATACGCGAACTATGAGACGACGTTCCCTCGCATCTGGAGCAATGAAGGGCCTGCAGGATACCCGCCGATTAACATGCTGGCATCTACGCTTGATAGCCGCATTGTTTACGATGGGCCACAGGTTTACTACATCAACCGCAACGGCAATCTTGTGCAGTCCGCCGCTAATGAATGGCCTCTTACGTTTATTGATGGGGTTGCTGTTGGGCGTGTACCACCGGAAAAGGCGGCTACCAATGTGGTAGAACATTCTAACAACTTACTATCTACATCATTTTCACGTGCCAGAACAACAACCACGGCGAGTTCTTTGACGTTATTCCAAGAAACTTACGCCGCTAAATTAACCGCAACGTCGGTATCAGGGAACCACTATATAAACCAGGCAGAGTCCCCAGAACAAGAAACAAGATACTCTATTAGTGCTATTATAAAAGCAGATGAGTACCAGTCATCCGCGGTAGTCATCGGCAACCGAAACGCTTTAGATAATTTCCAGTATGCCTATGTTGACTTAGCCTCTGGCTATTTGATATCAGGCGACACCTCAAGGTCGTTCGTAAGCAATCTTGGTGGTGGGTGGTATCACGTTTCAATGTCCGCGGACACTAACGACTCCGGCGGATTGATTTATTCGCAGATAAACATGTTGTCGCCGTCTAACTCCCTCACCTTCACAGGGGATGATGTCAGCGGGTTCATTACAGCCCTAATCCAGATGGAGCCTTCAGAGTTTGCCTCATCCCCGATAGTAACCGAGGAGTCACCGGTAACTCGTCCAACGGCATCAGCAAAAGTGGCAATGAACGGCGCGACAAGCATCGACATTACCTATTCCGACGGCTCTGTGGTAAACGTTCTGGCGGCAGATGATTACGCAACCATCCCGCAGGCTGATTCCGCGTGGGGTAGCAAGTACATCACTCGTATTGATTTTAATGTGGACGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
763b5fd52b1d3304be1a0f03a6333d3a18d8764dd602f425650f6c11571e10d6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8489
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank