Protein

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Genbank accession
AIA10319.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MASILTTVGRNKLASATPEQQLTISHIAVGDGNGDFPPLNPSMTSLVNEVWRGAASQPIRTADLGTLIFEGFIPGNIGGFFIREIAIFDNTGAMIAIGQTSVVEKPDPSSGSVVTIAPRLHVKLDNADQVDLIVQDVPYIDHAGLSNRSAADSHPATAISVDALPAIGFNNPTTVQAALSALKSAATKESQSSKTDAAANKLMLTGAFGLGGEAIASSNWNNITVSGFYTNSTSNQAELPIAALPLSLIHIQAGTNATQICGRTASDEPQMWRRSKQNGTWGAWVEFADQRYRFISDANLAVKSGLYSLPISAGALNAPVPNASGTLLVIQGGSGENFVSQMWTQSSDLTAERVFVRHKTSSGWTDWVEVYHTGNLPEVTQGEAEGTSSALRAWSPLRVRQAIEAWARTVNDEVGVVKYFISTVTPTGRYIKANGAAVSRTAYADLFAKVGTFWGAGDGSTTFNVPDLRGEFIRSWDDGRGIDAGRAFGSTQNENTPSDTMYRINNISPAFSFANGPMVSGSLITNATFKQANTGDNRPRNVALIAWIGY
Physico‐chemical
properties
protein length:550 AA
molecular weight: 58409,51020 Da
isoelectric point:5,59650
aromaticity:0,08182
hydropathy:-0,12800

Domains

Domains [InterPro]
DC_1371
STR
1–430
DC_1371
IPR022225
ATT
3–134
IPR022225 cd19958 cd19958 IPR037053
SSF88874
STR
414–548
SSF88874
IPR011083
ATT
415–473
IPR011083
AIA10319.1
1 550
Architecture
ATT
STR
ATT
STR
ATT 1-134 | STR 135-408 | ATT 409-473 | STR 474-548 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage X29
[NCBI] 		1500713 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIA10319.1 [NCBI]
Genbank nucleotide accession
KJ572845 [NCBI]
CDS location
range 20275 -> 21927
strand +
CDS
ATGGCTTCAATTTTAACTACCGTGGGGCGCAATAAGCTGGCTAGTGCAACGCCAGAGCAGCAACTCACTATCAGTCACATTGCGGTTGGTGATGGCAATGGCGATTTTCCACCGTTAAACCCTTCAATGACTTCATTGGTTAATGAGGTTTGGCGCGGAGCGGCATCACAACCAATTCGAACAGCCGATCTCGGAACGTTGATTTTTGAGGGGTTCATTCCCGGAAATATTGGCGGGTTTTTCATCCGAGAAATCGCGATTTTTGATAACACTGGCGCAATGATTGCCATCGGACAAACTTCAGTTGTTGAAAAACCTGATCCATCATCGGGTTCAGTTGTAACAATTGCCCCACGTCTGCACGTCAAATTAGATAATGCCGATCAGGTCGATCTTATCGTTCAGGATGTTCCATACATCGATCACGCAGGATTAAGCAACCGATCTGCCGCTGACTCTCACCCTGCAACTGCAATTAGCGTTGATGCGCTTCCGGCGATTGGGTTCAATAACCCAACAACGGTACAAGCTGCCTTGTCAGCGCTGAAATCAGCGGCCACAAAAGAAAGTCAGAGCTCAAAAACAGATGCAGCAGCAAACAAGCTAATGCTGACTGGGGCTTTTGGACTTGGCGGAGAGGCCATTGCAAGCTCTAACTGGAATAACATCACAGTAAGCGGCTTTTACACAAACTCAACCAGCAATCAGGCTGAATTGCCGATTGCTGCACTCCCTCTTTCTTTGATCCACATTCAGGCAGGAACCAACGCGACTCAGATTTGCGGACGAACAGCAAGTGATGAGCCGCAAATGTGGCGGAGATCAAAGCAAAACGGCACTTGGGGCGCTTGGGTTGAATTTGCCGATCAGCGCTATCGATTCATTTCAGATGCAAACCTTGCGGTAAAATCAGGCCTGTACAGCCTGCCGATTTCTGCTGGCGCGCTTAATGCCCCGGTTCCTAACGCAAGCGGCACTCTGCTGGTTATTCAAGGCGGATCTGGCGAAAACTTCGTTAGCCAGATGTGGACGCAATCAAGCGATCTCACTGCTGAGCGCGTTTTTGTCCGGCACAAAACCAGCAGTGGCTGGACGGATTGGGTTGAGGTTTATCACACCGGAAACTTGCCAGAAGTAACCCAAGGTGAGGCAGAGGGAACATCATCAGCTTTGCGTGCTTGGTCACCGCTTCGAGTTCGGCAGGCTATTGAAGCTTGGGCGCGGACTGTAAACGATGAAGTTGGTGTGGTTAAGTATTTTATTTCAACCGTTACCCCAACAGGCCGATACATTAAAGCCAACGGGGCCGCGGTAAGCCGAACTGCTTACGCTGATTTGTTTGCGAAGGTCGGCACGTTTTGGGGCGCTGGCGATGGCTCAACTACGTTCAACGTGCCAGATCTGCGCGGCGAGTTCATCCGCTCATGGGATGATGGGCGCGGCATTGATGCTGGACGTGCGTTTGGTTCAACGCAAAATGAGAATACGCCTAGCGATACAATGTACCGTATCAATAACATATCTCCGGCTTTTAGTTTTGCGAACGGCCCAATGGTTTCTGGGTCGCTCATTACTAACGCAACATTCAAACAAGCTAACACTGGTGATAATAGACCACGCAACGTAGCTTTAATCGCTTGGATTGGATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
119a6e215d08068a35bb29d3abdc173ab418b78c4f74c14646b8f5c96b752273
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7767
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequencing of Vibrio cholerae bacteriophage X29 Bhandare,S.G., Warry,A., Emes,R.D., Hooton,S.P.T., Barrow,P.A. and Atterbury,R.J. 2017-11-16 — GenBank