Protein

View in Explore
Genbank accession
QIG77291.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,57
Protein sequence
MELQSLXXXXXXXASIPISDPSRNKIINGDFRIWQRATSQTTADYGSDDRWANTHVGSTKTHSQQPFTVGQTEVPGEPIYFSRTVVTSVAGAGNYVLKHQKIENVRTLVGKRATITFYAKADSAKNIAVDLVQVFGTGGSPSSNVDFAPKKVLLSTSWQKFSYTVNIPSISGKTLGSNPDNYLGLRFWFDAGSNWNANTVSLGQQSGTFDIARVSLVEGDATSESDPFYERPLITETLLCYRYYIKYPVTVGNAGNYTVHITPTPMRTVPSISWIGTAANGNTQVFATGMYFTHSVTNTFAFSLDAEL
Physico‐chemical
properties
protein length:308 AA
molecular weight: 32931,37530 Da
isoelectric point:7,80114
aromaticity:0,11296
hydropathy:-0,24319

Domains

Domains [InterPro]
DC_0568
STR
20–308
DC_0568
IPR008979
STR
26–218
IPR008979
G3DSA:2.60.120.260
STR
84–237
G3DSA:2.60.120.260
QIG77291.1
1 308
Architecture
STR
STR 20-308
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM39
[NCBI] 		2509768 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG77291.1 [NCBI]
Genbank nucleotide accession
MN988559.1 [NCBI]
CDS location
range 157799 -> 158725
strand -
CDS
GTGGAACTACAGTCTCTNNNNNNNNNNNNNNNNNNNNGAGCTAGTATACCGATCTCAGATCCATCAAGAAATAAAATTATTAATGGTGATTTTAGAATCTGGCAACGTGCTACTTCTCAGACAACTGCAGACTATGGATCTGACGATAGATGGGCTAATACTCATGTAGGATCAACAAAGACTCATTCGCAGCAACCATTTACAGTAGGTCAGACTGAAGTACCTGGCGAACCGATTTACTTCTCAAGAACAGTAGTAACATCAGTTGCAGGTGCAGGAAATTATGTATTAAAGCATCAAAAGATTGAAAATGTACGAACGCTCGTCGGAAAGAGAGCTACTATTACATTTTATGCTAAGGCTGACTCAGCTAAAAATATTGCTGTAGATCTAGTTCAAGTATTCGGTACTGGTGGATCTCCCTCATCGAATGTTGATTTTGCTCCTAAGAAAGTTCTTCTGAGTACTAGCTGGCAGAAATTCTCGTATACTGTTAATATCCCGTCGATCAGCGGTAAAACTTTAGGATCGAATCCTGATAATTATTTAGGGTTAAGATTTTGGTTCGATGCAGGATCAAATTGGAACGCGAATACTGTCAGCTTAGGTCAACAGTCAGGGACATTCGATATCGCTAGAGTATCTCTAGTTGAAGGTGATGCCACAAGTGAGTCGGATCCATTCTATGAGCGTCCACTTATAACTGAAACTTTGCTCTGCTACAGATACTATATAAAATATCCTGTAACTGTTGGTAATGCTGGAAACTATACAGTCCATATCACGCCAACTCCAATGAGAACAGTTCCATCGATTTCATGGATTGGTACGGCTGCAAATGGAAATACACAAGTATTCGCGACTGGGATGTACTTTACTCATTCGGTTACAAATACGTTTGCATTCAGCTTAGATGCGGAGTTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
813cb45584ace995289436c206c0e82f7d44b4f91ca6ce9c571eb711f8408635
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8937
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank