Protein

View in Explore
Genbank accession
QQO89137.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,76
Protein sequence
MAIPSFLNFLEESKQLDEAFNSSPYELTFGKKNAGDIFFTFVDEDEKEFRIQFYTPQGLGKNVRQVFIGQKRGSTYPDAIGRFKNPMRVIASMIEATKQFMATPLGKTIDGFAINFSKKALERGVTLLPKIIRQSGLKQKLNVMDLTYTPIPDRAFVWVVRKGKDPAQVFDGPKMKGVTWDDPDKVGDVPDQKNNPDVGVSSSVDDSNGWKLTSDGNQPMMIWSGREKGRLVTANIAPHYNEPGVYVGAYMNEKSVRGQSADFIARQLKLPQVPISILNDFTTASTKFWKGSQQKSAPVDSNTTIGATSIEQLIDSGFVARVLGIIDTNIDQKASYLPGESIKKIGQARYQTKGGLVIIVSFDSVDGKNLKYSVFSEIETQPGVISGDARRVANEVMETITYVAEHQYRGEWEINAVPMSAPYPIKSIRHSQGWGYVETANWTLKIADAVLNRVKPGNTALLELNKEPLRGKHLLEIIPEKGDKTLMLKDRSGAIYGSIDLNAQGADLVNSGTLKMPSNAMVFGETVNGMSVTWTGVNFPKGGKYDGAVLTTNVTYYYDKGKVAFTPMVSNKGRTLNNPKTYELPLKKEFVQGVLDDTSDEMSMVTRNMQTLVSTNYNPKQVFLNDIYVDDSGAVLWRGHNMGDRRTTEIMLNTISKETERLEKEPGTTKKTGVDLATYAGSIRDNAPKGRDLDWQIYASRDGQTLNVDWDITFRRNTTEGAYREFKDQINRANQYLQTVYNDAKSKGYNPTVPNLMTLERARQSDEWAVSNGDSAYSEYEQSLGGNLQISLK
Physico‐chemical
properties
protein length:793 AA
molecular weight: 88323,80200 Da
isoelectric point:8,36969
aromaticity:0,09079
hydropathy:-0,50277

Domains

Domains [InterPro]
DC_0099
STR
1–793
DC_0099
QQO89137.1
1 793
Architecture
STR
STR 1-793
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQO89137.1
1 793
Domain Start End Length (AA) Confidence
N-terminal 1 456 456 0,7947
Central domain 457 757 302 0,7905
C-terminal 758 793 35 0,6738
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-456
Central
457-757
C-terminal
758-793

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenAc_BPS5
[NCBI] 		2801550 Uroviricota > Caudoviricetes > Pantevenvirales > Cvivirinae > Kuttervirus
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO89137.1 [NCBI]
Genbank nucleotide accession
MW355477 [NCBI]
CDS location
range 99430 -> 101811
strand -
CDS
ATGGCCATCCCATCTTTCTTGAACTTTCTTGAAGAGTCTAAACAATTAGACGAAGCGTTTAACTCATCCCCGTATGAATTGACATTCGGCAAGAAGAACGCTGGCGACATTTTCTTCACATTTGTTGATGAAGACGAAAAAGAATTCCGCATCCAATTTTATACCCCGCAGGGGCTGGGCAAGAACGTTCGTCAGGTCTTCATAGGCCAGAAACGTGGTTCGACCTATCCAGACGCAATCGGTCGTTTCAAAAACCCAATGCGTGTCATCGCATCCATGATCGAAGCAACAAAGCAATTCATGGCGACGCCTTTGGGGAAAACCATTGACGGCTTTGCAATTAACTTCTCCAAGAAAGCATTGGAACGTGGTGTTACCCTCCTGCCGAAGATCATCCGTCAGTCCGGCCTGAAGCAGAAGCTCAATGTCATGGACCTGACGTATACCCCTATCCCTGATCGTGCATTCGTATGGGTTGTGCGTAAAGGTAAGGATCCTGCTCAGGTATTCGATGGTCCGAAAATGAAAGGCGTGACTTGGGACGACCCAGACAAAGTCGGTGACGTTCCTGACCAGAAAAATAATCCTGATGTGGGTGTATCATCTTCTGTTGATGATTCCAACGGCTGGAAATTAACTTCAGACGGGAATCAGCCTATGATGATATGGAGTGGTAGAGAGAAAGGTCGCTTAGTCACGGCAAATATCGCCCCTCACTACAATGAGCCTGGTGTGTATGTTGGTGCCTACATGAATGAGAAATCTGTGCGCGGACAAAGTGCTGATTTTATTGCTCGTCAGTTGAAATTACCGCAAGTCCCTATCAGTATCCTGAATGATTTTACCACGGCGTCCACAAAATTCTGGAAAGGTTCTCAACAGAAATCTGCGCCTGTAGATTCCAACACCACAATCGGTGCAACCAGCATCGAACAACTGATCGACAGCGGTTTCGTCGCCCGTGTGTTGGGTATCATTGATACCAACATTGATCAGAAAGCAAGCTACCTCCCAGGAGAAAGCATTAAGAAAATCGGACAGGCGCGTTATCAAACCAAAGGCGGTCTAGTGATCATTGTCAGCTTCGATTCGGTCGACGGTAAGAATCTGAAGTACAGCGTGTTCTCTGAGATCGAAACTCAACCTGGTGTCATCTCTGGTGATGCTCGTCGGGTGGCAAACGAAGTCATGGAAACCATCACATACGTGGCTGAACATCAGTATCGCGGTGAATGGGAAATCAACGCAGTACCAATGAGCGCTCCATATCCTATCAAGTCCATCCGTCATTCTCAGGGATGGGGCTATGTAGAGACCGCAAACTGGACTCTGAAAATAGCCGATGCGGTTCTGAATCGCGTGAAACCAGGGAACACCGCTCTGTTGGAACTCAACAAAGAGCCTCTGCGCGGCAAGCACCTGCTGGAAATCATTCCAGAGAAGGGCGACAAGACTCTGATGCTAAAAGATCGCAGCGGAGCCATCTACGGTTCCATTGATCTGAATGCTCAGGGTGCGGATCTGGTCAACTCTGGAACCCTGAAAATGCCGAGCAACGCCATGGTATTTGGTGAGACTGTTAACGGTATGTCTGTCACATGGACTGGCGTCAATTTCCCGAAAGGCGGGAAGTATGACGGCGCGGTGTTGACAACTAATGTGACCTATTACTACGACAAAGGTAAAGTAGCATTCACTCCGATGGTCTCTAACAAAGGTCGCACCCTGAACAATCCGAAAACATATGAACTTCCTTTGAAGAAAGAATTTGTTCAAGGTGTTCTTGATGATACCTCTGACGAGATGAGTATGGTGACGAGGAACATGCAGACCCTCGTCAGCACGAATTACAACCCGAAACAAGTCTTCCTCAATGATATCTACGTGGACGACAGCGGCGCGGTGCTCTGGCGCGGCCACAACATGGGTGATCGCCGTACGACAGAGATCATGCTGAACACCATCAGCAAAGAAACCGAACGTCTGGAAAAAGAACCAGGGACTACCAAGAAGACGGGTGTCGACCTCGCAACATATGCTGGTTCTATCCGCGACAATGCTCCGAAAGGGCGCGACCTGGATTGGCAGATCTATGCAAGCCGTGATGGTCAAACACTGAACGTGGACTGGGATATCACTTTCCGTCGCAATACGACCGAAGGAGCATATCGTGAATTCAAGGATCAGATCAACCGTGCCAACCAATACCTGCAAACGGTATACAACGACGCGAAATCTAAAGGCTATAATCCTACCGTGCCAAATCTCATGACTCTTGAACGCGCTCGCCAATCCGACGAATGGGCTGTGAGTAATGGTGATAGTGCATACAGTGAATATGAACAATCGCTGGGTGGTAATCTTCAGATTAGTCTGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4d6c2a3b8b671fb693b793a99839c80e19e6399872df5236655b9cf8d3cf4639
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3426
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterisation of bacteriophages with activity against invasive non-typhoidal Salmonella causing bloodstream infection in Malawi Rodwell,E.V., Wenner,N., Pulford,C.V., Cai,Y., Bowers-Barnard,A., Beckett,A., Rigby,J., Picton,D., Blower,T.R., Feasey,N.A., Hinton,J.C.D. and Perez-Sepulveda,B. — — GenBank