Protein

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UniProt accession
A0A8S5U387 [UniProt]
Protein name
Collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MQPITLEYSADILAGIGMTGMPSLFAMGDKLAHVLRVRVKAGGEPVDLTGWTVTASVVRQDQATVMMAGRTVGDAAEVTLEAPCYSQSGGFTLSVAIGREQQLITIFCGRGDVTRTRTDSLVDPGHTIPSVDEIIAQYGLMKTAVQNTDAAAKRADDAASGAQKIANDVQKKLDNGEFVGATGPQGEKGEPGAQGPRGEKGDTGERGPQGETGATGPQGPQGETGAIGPQGPKGETGAIGPQGPKGKDGEVTFESLTDEQKASLRGEPGAKGEKGEKGEPGAKGEKGEKGDPGAQGEKGEKGDPGRDAPQEAVLYTAQTLNDAQK
Physico‐chemical
properties
protein length:325 AA
molecular weight: 33251,45230 Da
isoelectric point:4,85981
aromaticity:0,03077
hydropathy:-0,63200

Domains

Domains [InterPro]
DC_1341
STR
25–260
DC_1341 IPR008160
IPR050149
Unmapped
180–308
IPR050149
IPR008160
STR
180–229
IPR008160 DC_1397
G3DSA:1.20.5.320
STR
222–265
G3DSA:1.20.5.320
A0A8S5U387
1 325
Architecture
STR
STR 25-324 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ctBtV12
[NCBI] 		2825049 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF88924.1 [NCBI]
Genbank nucleotide accession
BK015999 [NCBI]
CDS location
range 1 -> 976
strand -
CDS
ATGCAGCCGATCACGCTTGAATACAGCGCGGATATCCTCGCCGGAATCGGCATGACGGGCATGCCGAGCCTGTTCGCGATGGGCGATAAGCTGGCGCACGTGCTGCGCGTTCGGGTGAAAGCGGGCGGAGAACCGGTCGATTTGACGGGATGGACGGTCACCGCCAGCGTGGTTCGGCAGGATCAGGCGACGGTGATGATGGCGGGAAGGACGGTCGGCGATGCGGCGGAAGTGACGCTGGAGGCGCCCTGCTACAGCCAAAGTGGCGGGTTTACGCTGTCCGTGGCCATCGGCAGGGAACAGCAGCTCATCACGATTTTCTGCGGCAGGGGTGACGTGACGCGCACCCGGACGGATTCGCTCGTCGATCCCGGACACACCATTCCGTCGGTGGATGAAATCATCGCGCAGTATGGGCTGATGAAAACTGCCGTTCAGAACACGGACGCGGCCGCCAAACGGGCGGACGATGCGGCGAGCGGTGCGCAGAAGATTGCAAACGACGTGCAAAAGAAGCTCGATAACGGGGAATTTGTCGGCGCGACCGGCCCGCAAGGCGAGAAAGGCGAACCCGGCGCGCAGGGGCCGAGGGGCGAAAAAGGCGACACCGGCGAGCGGGGGCCGCAGGGCGAAACAGGCGCGACCGGTCCGCAAGGACCGCAAGGTGAAACGGGCGCAATCGGGCCGCAAGGGCCGAAGGGTGAAACGGGTGCAATCGGGCCGCAAGGGCCGAAGGGCAAGGACGGCGAGGTGACTTTTGAAAGCCTGACGGACGAGCAGAAAGCGTCGCTTCGGGGTGAGCCCGGCGCAAAGGGTGAGAAGGGGGAGAAGGGCGAACCCGGCGCAAAGGGCGAGAAAGGGGAAAAGGGTGACCCCGGCGCGCAAGGCGAGAAAGGAGAGAAGGGCGACCCCGGCAGGGATGCGCCGCAGGAAGCGGTGCTGTATACGGCGCAGACGCTTAATGATGCGCAAAAGA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
6654d0ab5b60415cd19564d7f69e88dda09694be5ba743c4708bbe2c20ae9db7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6871
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50