Protein

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Genbank accession
XCO35987.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MAIKLSNNAVSHLAAELAQGDTQIILTPGEGSMFPTLGAGDYFQATLAKASGQYEIVRATARDVDTLTVLRAQENTQALHFAADDRIELRVTAGVLNTLIDVVRQIRPKLGDIKMWSGAVANIAAVHGPGWQLADGTNGTIDLRDRFVVGAGASYAPGNTGGANTVSISAEQMPAHNHGVSDPGHIHGVSDPTHAHSVYDPGHSHNTNSNYYNIGAGGSGTATPYNGSGQFVSGGAVIAAATGIAIYGAATGISIQSHATGVSTQSAGSGAAHENRPPYFALAFIQYTGAGVIEI
Physico‐chemical
properties
protein length:295 AA
molecular weight: 30240,10260 Da
isoelectric point:5,84171
aromaticity:0,06441
hydropathy:-0,04610

Domains

Domains [InterPro]
DC_0891
STR
1–294
DC_0891
cd22641
STR
89–183
cd22641
SSF88874
STR
108–285
SSF88874
XCO35987.1
1 295
Architecture
STR
STR 1-294 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO35987.1
1 295
Domain Start End Length (AA) Confidence
N-terminal 1 276 276 0,5176
Central domain 277 284 9 0,0017
C-terminal 285 295 10 0,9976
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-276
Central
277-284
C-terminal
285-295

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage NK-7
[NCBI] 		3233249 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO35987.1 [NCBI]
Genbank nucleotide accession
PP919442.1 [NCBI]
CDS location
range 39468 -> 40355
strand -
CDS
ATGGCTATCAAGCTGTCCAACAATGCAGTGTCCCATCTTGCCGCCGAGCTGGCGCAGGGCGACACCCAAATCATCCTGACGCCGGGCGAGGGCAGCATGTTCCCGACACTCGGCGCCGGAGACTACTTCCAGGCCACGCTCGCGAAAGCATCCGGCCAATACGAGATCGTGCGTGCCACTGCGCGCGACGTCGACACGCTGACCGTGCTGCGCGCCCAGGAGAACACTCAGGCGCTGCACTTCGCCGCTGACGATCGTATTGAGCTGCGCGTCACGGCTGGGGTGTTGAATACGCTCATCGATGTGGTGCGCCAGATTCGCCCCAAGCTGGGAGACATAAAAATGTGGAGCGGCGCAGTCGCCAACATAGCGGCCGTGCATGGGCCTGGATGGCAGCTTGCCGATGGAACGAATGGGACCATTGACCTGCGGGATCGGTTCGTCGTCGGGGCGGGTGCATCCTATGCGCCAGGGAACACCGGCGGCGCCAACACCGTCTCGATTTCCGCAGAGCAGATGCCCGCTCATAATCACGGTGTCAGCGATCCGGGCCACATCCATGGAGTGAGCGACCCGACCCACGCGCACAGCGTCTATGATCCTGGTCACTCGCACAACACGAACTCGAATTACTACAACATCGGGGCGGGTGGCAGCGGTACGGCTACGCCTTACAACGGAAGCGGCCAATTCGTCTCTGGCGGCGCAGTCATCGCGGCCGCCACCGGCATCGCCATCTATGGGGCCGCTACCGGAATTTCGATTCAGAGCCACGCAACTGGCGTCAGCACTCAGAGCGCGGGCAGTGGTGCTGCGCACGAGAACCGACCGCCGTATTTCGCGCTGGCGTTCATCCAGTACACTGGCGCTGGTGTGATTGAAATCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f10bfe095595abe267f2262797c24ed8a91324ef59abc2e9f0ad2db57cb8de69
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8180
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50