Protein

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Genbank accession
XLL20553.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MNSIIKNMPQGNERNKIEYLAENIHLLSGNFQLLDETQKTILLGLAGIETAPKNLLTNPNFSMSGMSEIDATSFNISQWHDQTNVVRAVQPVGAMAIGDSRGGIAPYGWGLEVAPATVDDGYYSSSVRQGTDSTFPIEKEYNAEWKLYGRKVKFIAFNVFSVGFSQSTIGIGAGRYRKYSAYLSGRYHKASRFGVCKLNANGELDSIVAEMPLNNDTAGMSYTASNVWLHNIELEQGHVYAFFVEVDYPSTSGQRLFEPSEAGVFENDSGEDIVPSMTSQRAMTVAATKYQIAKPTSAEMASGLTMNAPPYPCPLGIEKHLIFASTKTQGKEVNLAANALIATQSGYGHDVLISGDIGNLSHGDIRAHYSDTPLYLNFY
Physico‐chemical
properties
protein length:379 AA
molecular weight: 41365,92500 Da
isoelectric point:5,40183
aromaticity:0,10026
hydropathy:-0,24987

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLL20553.1
1 379
Domain Start End Length (AA) Confidence
N-terminal 1 48 48 0,9661
Central domain 49 247 200 0,0029
C-terminal 248 379 131 0,9926
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-48
Central
49-247
C-terminal
248-379

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 10N.286.54.E11_PE003
[NCBI] 		3385329 Viruses > Varidnaviria > Abadenavirae > Produgelaviricota > Belvinaviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLL20553.1 [NCBI]
Genbank nucleotide accession
PQ189349.1 [NCBI]
CDS location
range 10323 -> 11462
strand +
CDS
ATGAACTCAATTATTAAAAACATGCCGCAAGGCAATGAACGCAACAAAATCGAATACCTCGCTGAAAATATTCATTTGCTCAGTGGCAATTTTCAATTACTCGATGAAACGCAAAAAACCATTTTATTGGGGCTTGCGGGCATAGAAACCGCGCCGAAAAATCTACTCACTAATCCTAATTTCTCTATGTCAGGCATGAGTGAGATTGATGCTACGAGCTTTAATATTAGCCAATGGCATGACCAAACCAATGTCGTTCGTGCGGTGCAACCTGTTGGCGCGATGGCCATCGGTGACAGTCGCGGCGGGATTGCGCCTTACGGTTGGGGTTTGGAAGTTGCGCCCGCGACCGTTGATGATGGTTATTATTCTTCATCAGTTCGCCAAGGTACAGATTCCACATTTCCTATTGAAAAGGAATACAACGCAGAATGGAAACTCTACGGACGCAAGGTGAAATTCATTGCGTTCAATGTCTTTTCCGTTGGATTTAGCCAAAGCACCATTGGCATTGGTGCGGGTCGTTACCGTAAATACTCCGCTTATTTATCAGGGCGCTACCACAAGGCGAGCCGATTTGGCGTGTGCAAGCTGAACGCCAACGGTGAATTGGATTCAATCGTGGCTGAAATGCCACTCAACAATGACACTGCAGGTATGAGCTATACCGCGTCCAATGTCTGGCTGCATAACATCGAACTTGAGCAAGGGCATGTCTACGCCTTTTTTGTTGAAGTTGATTACCCTAGCACTAGTGGTCAGCGATTATTTGAGCCCTCCGAAGCGGGCGTGTTTGAAAATGATTCTGGTGAAGACATCGTGCCATCAATGACCAGTCAACGAGCCATGACCGTCGCCGCGACTAAATACCAGATTGCTAAACCAACCAGTGCAGAAATGGCGAGTGGATTAACAATGAATGCACCGCCTTATCCATGCCCATTAGGTATAGAAAAGCACCTCATATTTGCCAGTACTAAAACCCAAGGCAAAGAAGTGAATTTGGCTGCTAATGCCCTTATTGCTACGCAGTCAGGTTACGGGCATGACGTGTTGATTTCCGGTGATATTGGCAATCTAAGTCATGGGGATATTCGCGCTCATTATTCAGATACTCCGCTGTATCTGAATTTTTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
104902373f89932466b3f329252ea92756d89a1bc4f61bf87c9b8c61323770ce
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4685
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50