Protein

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Genbank accession
XKC23465.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSIKPWEKYQPNALLPSAQYPYGGLKQETSLGAGNGTPLDVDWGNDFEAFKQTSFSRSGLTPSGNADTVTNSEMFNAMQDTISRNIWKRLAAEIGYILVSGSFEEGSTIINNSECIWYKNENKLYIWKGSIPPSGKIVIPKSTPSSSGGVSPTAWESLSDMTFRGELSTSGGGSLIGYGSSTVSDTLDFLSPTNKAIHSTSLVRPVFIRQICSTVTGNNSVTVQDASAFEVGDNLLLCAGGVQNYSVSFDIKGSPLRNGTIYLVLDGYLISNIPVLSSDTATIIASKLRSVSVSGWSSSGTGAIATFTKSTPGVTVGAYISDIELVGLPYTEAIITDPTFHQISKITGINTVSNTLTLNSNAQYTGNGLCYLEHGKAINDATQNGTVSIVMDGGEYLFHDGLKFTSDFTGIIGGKNGDITIYAIGGKDVPIIECEKPSAGEAYYGSVINNIFIDMQNSRRPGIVGSRLWDASSWENIIVDRVHPSFVGVSVRKHSSQPTPTTANDQTVVSQSVCMRGVHAISRSPMSGLPIYMEYVQEANLDNVKGVFAADFNSVALTETTSAGIQLEACRGIVGVNMSASGTKDGVVITSINGESRGITLIGPTLETNENNVNVRGGSYDISDVNIINPRTIGGGTGKFKIQRLTRGRIECGDRPIDIASTCKGVHGIVDGAATAVNAGPGCYITRTSMIGTNVTAQSYPSGLSLSCGGNRVDILPSGLDVIASGSKVIGVDYPFTSNETAAVLMVNKEGILALSRVLVGPSDSAQSGFRLLRVLN
Physico‐chemical
properties
protein length:777 AA
molecular weight: 82029,26740 Da
isoelectric point:5,39444
aromaticity:0,07079
hydropathy:-0,04144

Domains

Domains [InterPro]
DC_0226
STR
1–537
DC_0226
G3DSA:2.10.10.80
ATT
95–170
G3DSA:2.10.10.80
IPR040775
RBD
96–160
IPR040775
XKC23465.1
1 777
Architecture
STR
ATT
STR
STR 1-94 | ATT 95-170 | STR 171-537 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XKC23465.1
1 777
Domain Start End Length (AA) Confidence
N-terminal 1 298 298 0,7893
Central domain 299 731 434 0,9418
C-terminal 732 777 45 0,8925
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-298
Central
299-731
C-terminal
732-777

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage PhAER-4
[NCBI] 		3378351 Viruses > unclassified bacterial viruses >
Host Aeromonas sp.
[NCBI] 		647 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKC23465.1 [NCBI]
Genbank nucleotide accession
PQ495741.1 [NCBI]
CDS location
range 70389 -> 72722
strand +
CDS
ATGTCAATAAAACCTTGGGAAAAATACCAACCTAATGCTTTATTACCTTCTGCACAATATCCTTACGGAGGTTTGAAACAAGAGACATCATTAGGTGCAGGAAATGGTACACCTCTGGATGTAGATTGGGGTAATGATTTCGAAGCTTTTAAACAAACATCTTTTTCACGTTCAGGGTTAACACCTTCAGGAAATGCGGATACTGTAACAAATAGTGAAATGTTCAATGCAATGCAAGACACTATTTCTAGGAATATATGGAAAAGGCTTGCTGCTGAAATTGGTTACATTTTAGTTTCTGGTAGTTTTGAAGAAGGCTCCACCATAATAAACAACTCTGAATGTATTTGGTACAAAAATGAAAACAAGTTATATATATGGAAAGGATCAATTCCGCCCAGTGGAAAAATAGTTATTCCAAAATCAACGCCGTCATCTAGTGGAGGCGTATCCCCGACAGCATGGGAATCACTAAGTGATATGACATTTAGAGGTGAATTATCTACTTCAGGTGGTGGGAGTTTAATTGGTTATGGGAGTAGTACAGTTAGTGATACATTAGATTTTCTAAGTCCAACAAATAAAGCTATCCACTCAACAAGTTTAGTAAGACCTGTTTTTATTCGTCAAATTTGCTCGACAGTTACTGGAAATAACAGTGTAACTGTGCAAGATGCGAGTGCATTTGAAGTGGGGGACAACCTACTGTTGTGCGCAGGTGGGGTACAAAACTATAGTGTCAGTTTTGACATTAAAGGTAGTCCGTTGCGTAACGGAACAATATACTTGGTACTTGATGGTTATCTTATTTCAAACATACCAGTATTATCATCTGATACAGCTACAATTATAGCATCTAAGCTTAGATCTGTTTCTGTGAGTGGATGGAGTTCTTCTGGAACAGGAGCAATTGCTACCTTTACCAAATCAACACCGGGAGTCACTGTTGGTGCCTATATTTCAGATATTGAACTAGTTGGACTGCCTTACACAGAGGCTATCATTACTGATCCAACATTTCATCAAATATCTAAAATAACAGGTATCAATACAGTATCAAACACTCTAACATTAAACTCTAATGCACAGTACACTGGTAACGGTTTGTGTTATTTAGAGCATGGTAAGGCGATAAATGATGCCACACAAAACGGGACAGTCAGTATTGTTATGGATGGTGGAGAATATTTGTTTCACGATGGTCTGAAATTCACATCTGACTTTACAGGTATTATTGGTGGGAAAAACGGAGACATCACTATCTATGCAATAGGTGGTAAGGATGTGCCAATTATAGAGTGTGAAAAACCATCTGCTGGAGAGGCATATTATGGCAGCGTAATAAATAACATATTCATTGATATGCAAAATTCCCGCCGCCCCGGGATAGTAGGTAGTAGGTTGTGGGATGCCAGTTCGTGGGAAAACATAATTGTAGACAGGGTACACCCATCATTTGTCGGCGTATCAGTCAGAAAACATAGCTCTCAGCCAACACCAACAACTGCCAATGACCAGACTGTGGTGTCTCAGTCTGTTTGTATGCGGGGAGTCCATGCCATATCACGAAGCCCAATGTCAGGTTTGCCAATCTATATGGAATATGTGCAAGAGGCTAACCTTGATAACGTTAAAGGCGTGTTCGCTGCTGATTTCAACTCTGTTGCGCTCACTGAAACTACGTCTGCTGGTATCCAGTTGGAAGCATGTCGAGGAATAGTCGGAGTCAACATGTCCGCATCTGGAACGAAAGATGGTGTTGTAATTACATCTATAAATGGTGAATCACGAGGTATAACACTTATCGGGCCGACGCTAGAAACAAATGAAAATAATGTGAATGTTCGTGGCGGGTCTTACGATATATCGGACGTCAATATCATAAACCCTAGGACTATCGGTGGCGGCACAGGGAAATTCAAAATCCAGCGCCTTACTCGCGGACGTATCGAGTGCGGTGACCGTCCGATAGATATAGCATCCACATGTAAGGGTGTACATGGTATCGTTGACGGTGCGGCCACTGCGGTTAACGCAGGGCCAGGTTGCTATATAACGAGAACATCTATGATCGGCACGAACGTCACGGCGCAGTCCTACCCCAGCGGATTGAGTTTGTCATGCGGGGGCAACAGGGTGGACATACTACCATCGGGGTTGGACGTTATTGCATCGGGTAGTAAAGTGATTGGGGTTGATTACCCGTTCACTTCGAACGAAACGGCTGCTGTTCTGATGGTGAACAAGGAAGGAATACTAGCACTGTCTCGGGTGTTAGTAGGGCCGTCCGACAGTGCTCAATCTGGATTCAGGTTATTAAGAGTTCTGAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5a2878ff0b6cc4c3f9c0bb1d1b2568897a1b843697ad4362a6a3e2b4308f4ce1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7534
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50