Protein

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Genbank accession
YP_009910769.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKRVLNLGNLSRIVEGDPNEITDDEILVIKDKIIEGKIIDIQKRVDGKLVSLITEKYTYTINPTPADAIVVINGSTTKSIRAAKGHTVTWSVSKTGFVTQSGSDVISGDVSKDVTLVANPAS
Physico‐chemical
properties
protein length:122 AA
molecular weight: 13094,82500 Da
isoelectric point:6,56743
aromaticity:0,03279
hydropathy:-0,05656

Domains

Domains [InterPro]
DC_0972
ATT
1–55
DC_0972 IPR057859
IPR057859
RBD
56–119
IPR057859
YP_009910769.1
1 122
Architecture
ATT
RBD
ATT 1-55 | RBD 56-119 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage crAss001
[NCBI] 		2301731 Uroviricota > Caudoviricetes > Crassvirales > Asinivirinae > Kehishuvirus
Host Bacteroides intestinalis
[NCBI] 		329854 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009910769.1 [NCBI]
Genbank nucleotide accession
NC_049977.1 [NCBI]
CDS location
range 26039 -> 26407
strand +
CDS
ATGAAAAGAGTACTTAATCTTGGTAATCTTTCAAGGATAGTTGAAGGAGACCCTAATGAAATAACAGATGATGAAATTCTTGTAATCAAGGATAAGATTATAGAGGGTAAGATAATTGATATTCAAAAGAGAGTTGATGGTAAATTAGTATCTCTTATTACTGAGAAATACACTTATACTATCAATCCTACTCCTGCTGATGCTATAGTAGTTATCAATGGTTCAACTACTAAGAGTATTAGGGCAGCTAAAGGACATACAGTTACTTGGTCTGTATCAAAGACTGGTTTTGTAACTCAGTCTGGTAGTGATGTAATCTCCGGTGATGTATCAAAGGATGTAACATTAGTAGCTAATCCAGCATCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
015ef70974a1b275e613eb7cf9ba0ede42ee240d4ce0fb7c75fdb9d89fe70d16
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8540
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
PhiCrAss001, a member of the most abundant bacteriophage family in the human gut, infects Bacteroides Shkoporov,A.N., Khokhlova,E.V., Fitzgerald,C.B., Stockdale,S.R., Draper,L.A., Ross,R.P. and Hill,C. 2018-06-26 — GenBank