Protein

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Genbank accession
AVH85349.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,79
Protein sequence
MTLKVMQGFETCRDDSDLRAQNWLKSPTLDYAGFPGATTAVGNTGIKQFTVASAAATVVGNASAADLGYYNTGITVNQAWTAGGFTFGASATFYSGTAGAAIGSALSTSQYMNQIVFDGTRYWSIQSNPTIQVVTSTDLITWTATPSQPGGLTGTAGNSVSYMGGGVVMVIPGGGASNIVYYTSNNGSSWSSQSFGAATGPIYGAGCATGNSTYPHCVAINSSNTSSWNGVWIGTLGGTMTQAVSPGAYAATGLLSRPKIINGYIICTLGNNGIYSALASSASLNTTGAWTKWTYTGQNLTDVNYFQPTNVWIVSGYQAGVVTIPNLGGSGTPTPPTTGSGTSVYASPIYGLIVSSTNVTMLPAATTTGNVSLLTSTTAASGSWTNTSRILPYLGANINGFKESYYDGTKWIVVGWASGTSSSQVICTTTDGLNNWQTKYMTDVAPSTTGGFSGLGVCAATAAPTSGSAWTQVGGTAWLNCSTPASNSSTITVYTAAGTTAAFTATQASTTLTHTYEVKATAVPGTTNSFTITLYIDGTLQSGSATVAMGSGTSDTTSLLILNLPRSGNWQQFDDVVFTLDDGSGIVGPLGVMNIVARRPTTDTQAQWTINGSAVSDSLSVNQSALSSQSTNYISTFTDGAKDIYTSSDTLPTNYKPIAVQVEGYFAKGGTNAPVVSLGIQSGSTEVDSSNLTVNNSTATYLSQIVEKDPNGNIAWTTTSVTNSKLVVNKIS
Physico‐chemical
properties
protein length:732 AA
molecular weight: 75146,13130 Da
isoelectric point:4,83918
aromaticity:0,09153
hydropathy:0,01052

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AVH85349.1
1 732
Domain Start End Length (AA) Confidence
N-terminal 1 31 31 0,8402
Central domain 32 299 269 0,9366
C-terminal 300 732 432 0,4075
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-31
Central
32-299
C-terminal
300-732

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RsoM2USA
[NCBI] 		2070027 No lineage information
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVH85349.1 [NCBI]
Genbank nucleotide accession
MG752970 [NCBI]
CDS location
range 296442 -> 298640
strand +
CDS
ATGACATTGAAAGTTATGCAGGGATTTGAAACGTGCAGAGACGATTCAGATCTTAGAGCACAAAATTGGTTGAAATCACCAACATTAGATTATGCAGGATTTCCTGGAGCAACCACGGCAGTTGGAAATACTGGAATTAAACAGTTTACGGTGGCCAGCGCTGCCGCTACCGTGGTCGGTAATGCATCGGCTGCGGATCTAGGATATTACAATACGGGTATCACCGTTAATCAGGCATGGACTGCTGGTGGTTTTACATTTGGGGCATCCGCGACGTTTTATAGTGGTACTGCAGGTGCCGCAATTGGATCTGCCCTGAGTACCAGCCAATATATGAATCAAATAGTTTTTGATGGAACTAGATATTGGTCAATTCAATCAAACCCAACTATACAGGTCGTAACTTCTACCGATTTAATTACCTGGACAGCAACACCATCCCAGCCTGGAGGTTTAACAGGTACAGCTGGTAATAGTGTGTCATATATGGGCGGCGGTGTAGTGATGGTGATACCTGGTGGAGGTGCGTCAAACATCGTGTATTACACCTCCAATAATGGATCATCATGGAGCTCGCAGAGTTTTGGTGCGGCAACCGGACCTATTTATGGTGCTGGATGTGCCACTGGTAATTCGACATACCCACATTGCGTAGCGATTAACTCATCAAACACATCTTCATGGAACGGAGTGTGGATTGGTACACTTGGTGGAACTATGACGCAGGCTGTATCGCCTGGTGCGTATGCTGCAACTGGTTTGCTATCACGTCCTAAAATCATAAATGGATACATCATTTGTACGTTGGGAAATAACGGAATATATTCGGCTCTTGCGTCAAGCGCAAGCTTGAATACTACCGGCGCGTGGACTAAATGGACCTACACTGGTCAAAACTTGACGGATGTAAACTACTTTCAACCAACAAACGTGTGGATTGTTAGTGGCTATCAGGCAGGCGTCGTAACAATTCCAAATCTCGGTGGGTCTGGAACACCAACTCCACCAACTACTGGCTCGGGAACTTCGGTGTATGCGAGTCCGATATATGGATTAATAGTTAGTTCAACGAACGTAACAATGTTACCTGCTGCTACTACAACTGGTAACGTGTCTCTTCTCACATCGACTACCGCGGCGTCCGGAAGTTGGACAAATACGTCAAGAATTCTACCGTATCTGGGTGCGAACATCAATGGATTTAAAGAATCGTATTATGATGGAACAAAATGGATAGTTGTTGGTTGGGCAAGTGGAACATCGTCTAGTCAGGTTATTTGCACGACAACCGATGGATTGAACAATTGGCAAACAAAATATATGACGGATGTGGCGCCATCTACGACCGGTGGATTTAGTGGTCTTGGTGTCTGTGCTGCTACCGCAGCCCCTACTTCTGGATCAGCTTGGACGCAGGTAGGTGGAACTGCATGGCTGAATTGTTCAACTCCTGCATCAAATTCTTCCACAATAACGGTGTACACCGCCGCTGGTACGACTGCAGCATTTACGGCCACACAAGCATCAACTACCTTGACACATACATACGAGGTTAAGGCAACAGCAGTTCCAGGAACTACTAATAGTTTTACTATTACACTTTACATAGATGGAACACTTCAGAGTGGCTCTGCTACGGTCGCAATGGGATCTGGGACATCGGATACAACATCATTGCTGATCCTTAATTTACCTAGATCGGGTAACTGGCAGCAATTTGATGATGTGGTGTTTACTCTTGATGATGGATCTGGTATAGTAGGTCCATTGGGTGTTATGAACATAGTAGCACGAAGACCAACTACTGATACGCAGGCACAATGGACAATCAATGGATCCGCTGTTTCAGATTCTCTGTCTGTGAATCAATCTGCACTGTCTTCACAGTCTACTAATTACATTTCTACGTTCACTGATGGTGCTAAAGACATTTACACGTCTTCAGATACTCTTCCTACAAACTATAAACCGATTGCCGTTCAAGTAGAAGGATATTTCGCTAAAGGCGGAACAAATGCTCCAGTTGTAAGTCTGGGAATTCAGAGTGGATCTACTGAAGTTGATAGCTCAAACTTAACGGTAAATAACTCCACTGCTACTTACCTAAGTCAGATAGTTGAAAAGGATCCGAATGGAAATATCGCGTGGACTACAACTAGTGTTACAAATTCAAAACTGGTAGTCAACAAGATATCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fd465dd0e85bee3939e3d405f38e05d3b9ed9271ca2da2ed598cf47b86250b3f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5592
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of RsoM2USA, the largest bacteriophage infecting plant pathogenic bacterium Ralstonia solanacearum Ahmad,A.A., Addy,H.S. and Huang,Q. 2021-09-27 — GenBank