Protein

View in Explore
Genbank accession
QBQ76148.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADYKLSELNSIDTIRSDDLLHVRVKKRPEMLGDEDRRMTYQDFLASFKLERFVQIAGSTMTGDLGIIKLLYGGKVVFNPTGSSEITIGDVLKTFKINANGLKLTIADASRSATVYHTLNKPSPNELGMRTNEENDARYARLAVTNNFSIRQAIVTDGEQLTLKKATNAGASYIQGRDANNQQTWYVGQGNANNTNVYLYNHATGSMLTLDATASFDKTLRVMGQVQPSDFSNLDARYFTQTVANQKFAQLAGDNTFSGSNIFTNFVVKKNANAITLQNVDTTAALYIQAKKSDGTCKWYIGNDTDENTVNIYNYLANTQISLGNTIAMSRTVQITGQVQPSDWTNIDSRYIPAGTLSNLAKLSDVNTFRSAQVIKQNGPLLQLRNTIQDKEVYLSAHNADDVRRWYIGNGETADPTRLIIHNDRTATTIYMGSDFLLNKTVRITGQVQPSDWSNLDDRYYVKSATDAKYLWSASRALVEESDGGVAWNQPSGIYVETIKGGGSSRLVLHLFANTLASTPTAQLRFDYRNSGLWYRTARDRQGFEAEWSKVYTEAQRPNPSEIGAYTKAETDQKIAEAISDSTDLNKIYPVGIVTWFNSNVNPNTALPGLTWTYLNNGVGRTIRIAAANGSDVATTGGSDSVTLAVGNLPSHTHSFSATTSSFDYGTKGTNSTGGHTHSVSGTTSAAGNHAHHLGLLLVNGGDAQYGYTTIGNNKTRTLDWLDRTDNKFPNTNTTGNHTHTWSGTTSGAGDHSHSVGIGAHSHTVSGNTGSTGSGSAFSVTNQFYKLMAWVRTA
Physico‐chemical
properties
protein length:794 AA
molecular weight: 86641,75970 Da
isoelectric point:7,78167
aromaticity:0,08816
hydropathy:-0,46222

Domains

Domains [InterPro]
DC_1566
STR
65–794
DC_1566
G3DSA:6.20.80.10
STR
157–218
G3DSA:6.20.80.10 G3DSA:6.20.80.10 G3DSA:6.20.80.10 IPR022246 IPR005003 IPR005003 IPR005003 IPR005003
IPR048388
ATT
158–247
IPR048388 IPR048388 IPR048388
QBQ76148.1
1 794
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
STR 65-157 | ATT 158-247 | STR 248-273 | ATT 274-357 | STR 358-380 | ATT 381-465 | STR 466-794
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBQ76148.1
1 794
Domain Start End Length (AA) Confidence
N-terminal 1 84 84 0,8311
Central domain 85 283 200 0,1871
C-terminal 284 794 510 0,8130
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-84
Central
85-283
C-terminal
284-794

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_LMP33
[NCBI] 		2491664 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ76148.1 [NCBI]
Genbank nucleotide accession
MK482689.1 [NCBI]
CDS location
range 12040 -> 14424
strand +
CDS
ATGGCAGATTACAAATTGAGTGAATTAAACTCAATCGACACAATCCGTTCAGATGACCTTCTTCATGTCAGAGTTAAAAAGAGACCTGAAATGCTGGGTGATGAAGACCGTCGAATGACCTATCAAGACTTCTTAGCATCTTTTAAACTTGAAAGATTTGTTCAGATTGCTGGTAGCACTATGACTGGTGACTTAGGGATTATTAAGTTACTTTATGGTGGTAAGGTAGTATTTAACCCGACAGGCTCTTCTGAGATTACTATTGGGGATGTTTTAAAGACTTTTAAAATTAACGCAAATGGTCTTAAACTAACTATTGCAGATGCTTCAAGGTCAGCAACTGTTTACCATACTCTGAATAAACCAAGTCCTAATGAACTTGGGATGAGAACTAATGAAGAGAATGATGCAAGATATGCAAGGCTTGCTGTTACAAATAACTTCAGCATTAGGCAAGCAATTGTAACTGATGGTGAGCAGTTAACCCTTAAGAAAGCAACCAATGCAGGTGCTTCATATATTCAAGGTAGGGATGCTAATAACCAGCAAACTTGGTATGTTGGGCAAGGAAATGCAAATAATACTAATGTTTATTTGTACAATCATGCCACCGGTTCAATGTTGACACTTGATGCAACAGCATCGTTTGACAAGACACTAAGAGTTATGGGTCAAGTTCAACCTTCTGACTTCTCTAACTTAGATGCTAGATATTTTACTCAGACAGTGGCTAATCAGAAATTTGCACAGTTGGCTGGTGATAATACTTTTAGTGGCTCTAATATTTTCACTAACTTTGTTGTTAAGAAGAATGCTAATGCTATCACTCTGCAAAATGTAGATACAACTGCTGCTTTGTATATCCAAGCAAAAAAATCAGATGGAACTTGTAAGTGGTATATTGGTAATGATACCGATGAAAACACTGTAAACATCTATAACTACTTAGCAAATACACAAATCTCACTAGGTAACACCATTGCCATGAGCAGAACAGTCCAAATCACTGGTCAAGTTCAACCTTCTGATTGGACTAACATCGACTCTAGATATATTCCAGCAGGAACTTTGAGTAATCTTGCTAAGCTAAGTGATGTAAACACTTTCAGGTCTGCACAGGTTATTAAACAGAATGGCCCATTATTGCAACTAAGGAATACTATTCAGGATAAAGAGGTGTATCTCTCTGCCCATAATGCTGACGATGTGAGAAGGTGGTATATTGGGAATGGAGAAACAGCAGACCCGACCAGACTCATTATTCACAATGACAGGACTGCTACCACCATTTACATGGGGAGTGATTTCTTACTGAATAAAACTGTTAGAATCACTGGTCAGGTACAACCATCTGATTGGTCTAACTTAGATGATAGATACTACGTTAAATCTGCAACCGATGCAAAGTACTTATGGTCAGCATCCAGAGCTTTAGTGGAGGAGTCTGATGGTGGTGTGGCTTGGAACCAACCTTCAGGAATTTATGTAGAGACTATCAAGGGTGGTGGTTCAAGCCGTTTAGTCTTACACCTATTCGCTAATACGTTAGCATCAACACCAACTGCACAATTAAGGTTTGATTACAGGAATAGTGGTTTATGGTATAGAACAGCTAGAGATAGGCAGGGTTTTGAGGCTGAATGGTCTAAGGTTTACACTGAAGCTCAGAGACCAAACCCTTCAGAGATTGGTGCATACACTAAAGCTGAAACTGACCAGAAAATTGCAGAAGCAATTAGTGACTCTACAGACCTTAATAAAATCTACCCAGTTGGTATTGTAACATGGTTTAACAGTAATGTTAACCCTAACACAGCGTTGCCTGGGTTAACTTGGACGTACCTGAACAATGGTGTTGGTAGAACTATCAGAATCGCAGCAGCAAACGGTTCAGATGTTGCTACAACTGGTGGTTCAGACTCTGTAACTTTAGCTGTTGGTAACTTACCATCGCACACTCACAGTTTCTCTGCCACCACTTCATCTTTTGATTATGGTACGAAGGGCACTAATAGTACTGGTGGTCATACTCACTCTGTAAGTGGTACAACAAGTGCTGCTGGTAACCACGCTCACCACTTAGGTCTACTATTGGTTAATGGTGGTGATGCTCAGTACGGTTATACCACTATTGGTAACAACAAGACAAGAACTCTTGACTGGCTTGACAGAACTGATAACAAGTTCCCTAACACTAACACAACTGGTAACCATACACACACATGGTCTGGTACTACAAGCGGTGCTGGTGACCATTCCCACTCTGTAGGTATTGGTGCTCACAGCCACACAGTCAGTGGTAACACTGGTAGTACAGGTTCTGGTTCAGCATTTAGTGTTACTAACCAGTTCTACAAGTTAATGGCTTGGGTGAGAACTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
59a249c2d19d6e2fc6c904ce13404dd34a765b904ca409e7866bd2748ecb8037
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6892
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Draft Escherichia bacteriophage genome sequences from raw wastewater Keely,S.P., Herrmann,M.P., Korajkic,A., Brinkman,N.E., McMinn,B.R., Fout,G.S. and Villegas,E.N. 2019-06-27 — GenBank