Protein

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UniProt accession
A0A8S5PRM0 [UniProt]
Protein name
Nucleoid-associated protein
RBP type
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,61
Protein sequence
METNELILKLDKDSTLPLIEGLGKSAYAIAVAHGFRGTEQEWLDSLKGLQGPQGEPGPKGDPFRYEDFTAEQLETLKGPKGPKGEDGANATADNARQLLLQGNVWCESTSVDDVLTALIGNMGKPFPRTEFKPLTVPSVIQGQPVVSVTGEPHYSVKVVGNDTPFTLDSTGTCNVTIPSLDEDDIKLTYLNFTGTKVSEHTIKGNRAEVLGEPDKQFELNKSVYKLYGRDLYIDISNIDDTQTRDLVCFYGNLNLTDIDKIYISSSNTKYLYLDKDNFTEYYSSLVKNNDNQPIFIKTINTVKLLTLMDSSVYPIVPKIGTPLYGAFPVQLIQNKEIVFDESTHRYVCK
Physico‐chemical
properties
protein length:349 AA
molecular weight: 38741,23990 Da
isoelectric point:4,81912
aromaticity:0,08883
hydropathy:-0,38023

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5PRM0
1 349
Domain Start End Length (AA) Confidence
N-terminal 1 215 215 0,9945
Central domain 216 338 124 0,6497
C-terminal 339 349 10 0,8492
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-215
Central
216-338
C-terminal
339-349

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ctHfT6
[NCBI] 		2825077 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE09799.1 [NCBI]
Genbank nucleotide accession
BK015493 [NCBI]
CDS location
range 33768 -> 34817
strand +
CDS
ATGGAAACAAATGAATTAATTTTAAAACTCGATAAGGATAGCACATTACCGCTTATTGAGGGTTTAGGTAAAAGCGCCTATGCTATTGCAGTGGCTCATGGGTTCAGAGGTACTGAACAGGAATGGCTTGATAGTTTAAAAGGTTTACAAGGTCCGCAAGGCGAACCTGGCCCAAAAGGCGACCCATTCCGATATGAGGATTTCACCGCCGAACAGTTAGAGACCCTAAAGGGCCCTAAAGGTCCTAAAGGGGAGGACGGAGCAAACGCTACGGCTGACAATGCTCGTCAGCTATTACTACAAGGTAATGTATGGTGCGAAAGTACCAGCGTTGACGATGTACTCACCGCCTTAATCGGTAATATGGGTAAACCGTTCCCTCGTACTGAGTTTAAGCCGTTGACTGTTCCTAGTGTCATTCAAGGGCAACCAGTGGTATCTGTTACAGGCGAACCGCATTACAGCGTTAAGGTAGTCGGAAACGATACGCCTTTCACGTTAGACAGTACTGGAACTTGTAACGTTACTATTCCATCTTTAGATGAAGATGACATCAAACTCACTTACCTCAATTTTACAGGCACAAAAGTGTCAGAGCACACAATCAAAGGCAATCGAGCAGAGGTGTTGGGCGAGCCAGATAAACAGTTTGAACTTAATAAATCCGTATACAAATTGTATGGGCGAGATCTGTATATAGATATTTCGAACATAGATGATACGCAAACTCGCGATTTAGTATGCTTCTACGGCAACCTAAATCTAACAGATATAGATAAAATTTACATCTCATCTTCTAATACGAAATATCTATATTTGGATAAGGACAACTTTACGGAATACTATTCTAGCTTAGTCAAGAATAATGACAATCAGCCTATTTTCATTAAAACAATAAACACGGTTAAATTATTGACATTAATGGATAGTAGCGTATATCCCATAGTGCCTAAAATTGGCACGCCTTTATATGGGGCGTTCCCGGTGCAATTAATTCAAAACAAAGAGATTGTATTTGATGAATCAACTCATAGATATGTTTGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
93c3762f48b92edadbf2cf23d181a447d2d41edf318d325a9fc798216202a087
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8253
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50