Protein

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Genbank accession
AWY09175.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,55
Protein sequence
MIWSLLMSSVSASAVVAGGIPTPSALDFSTAFATFTPAAGWGMVRRNDSYSGPACRVRDNANPGTFVDIYFDVDGYVTDAIPYGANTRVSILYDQFGTEDLVETGNVYVKANDGTFPTWRLSFIDNNGHLESTSTVADTPSWAINTPLWGANIVRPVDAAGLRNVFGVEGDITYMVYGLWLDGPDLHWRVNGLGATDWADTDWTLNPEVQGTLSSLVSDAAPGGSNAYHNGIKASTIAENPYPILDFSLSTAKLGLGGWSGLANNATVDIIELTVFDGVTMGYYDRLNLIEKLMLVDGTGLPTYAEKFPTDFVLGDAESGSTSISPWLNDSGSIQTVTTSYGIGPYEGLRFFSSAIAAPRSMWQTIAVPTALGGLVDYGMTAEVSFQISSPAAPDVHCIHVNATFEDAYGNPIAGRYSRRFAATTTNTWEAQTAFIPIPVGARVVTVYFEYYQRLAASRTNIDAISVAWVSNPDEVSADRSRTYAVLGASPNAVNVQRQRTYAVFGRHPEILAVNQHRTYVILE
Physico‐chemical
properties
protein length:524 AA
molecular weight: 56495,32410 Da
isoelectric point:4,56948
aromaticity:0,11260
hydropathy:-0,00611

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AWY09175.1
1 524
Domain Start End Length (AA) Confidence
N-terminal 1 106 106 0,1093
Central domain 107 308 203 0,6380
C-terminal 309 524 215 0,7736
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-106
Central
107-308
C-terminal
309-524

Taxonomy

  Name Taxonomy ID Lineage
Phage Ruegeria phage vB_RpoS-V10
[NCBI] 		2218616 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ruegeria pomeroyi DSS-3
[NCBI] 		246200 Bacteria > Proteobacteria > Alphaproteobacteria > Rhodobacterales > Rhodobacteraceae > Ruegeria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWY09175.1 [NCBI]
Genbank nucleotide accession
MH015255 [NCBI]
CDS location
range 50055 -> 51629
strand +
CDS
ATGATTTGGTCCCTTCTGATGTCGTCCGTATCCGCGTCAGCGGTAGTAGCTGGTGGAATTCCAACCCCATCAGCACTCGATTTCTCTACCGCGTTCGCGACGTTTACGCCTGCAGCCGGGTGGGGAATGGTCCGCCGCAACGATTCTTACAGTGGACCTGCTTGCCGTGTCCGGGACAATGCCAATCCCGGAACATTCGTGGACATCTATTTTGATGTCGACGGATATGTAACAGATGCCATCCCCTATGGGGCGAATACCCGCGTCTCCATTCTCTACGATCAGTTCGGCACCGAGGACCTCGTCGAGACTGGAAACGTGTATGTCAAGGCCAACGATGGTACCTTCCCGACTTGGCGCTTGTCGTTCATCGACAACAATGGGCATCTGGAATCAACATCAACCGTAGCCGATACCCCGTCGTGGGCAATCAACACACCCCTCTGGGGAGCGAACATTGTTCGCCCAGTGGACGCAGCAGGGCTGCGTAACGTATTTGGGGTCGAGGGTGACATCACCTATATGGTCTACGGTCTTTGGCTTGATGGACCTGACCTTCATTGGCGCGTCAACGGCCTCGGGGCCACAGACTGGGCAGACACAGACTGGACACTCAACCCAGAGGTGCAGGGAACTCTCTCATCTCTCGTTAGTGATGCAGCTCCCGGAGGCTCTAACGCCTACCATAACGGAATCAAGGCGTCCACCATCGCCGAAAATCCGTATCCGATCCTTGATTTCTCGCTCTCGACGGCAAAGCTCGGACTTGGTGGGTGGAGCGGTCTCGCAAATAACGCGACAGTGGACATCATTGAACTCACTGTGTTTGATGGCGTAACCATGGGGTATTACGACCGCCTCAACCTCATCGAAAAGTTGATGCTTGTAGACGGTACTGGCCTTCCAACATATGCAGAGAAGTTCCCAACGGATTTCGTTCTCGGAGACGCTGAATCTGGGTCTACATCTATTTCACCTTGGCTCAACGACAGTGGATCGATCCAGACTGTAACAACATCGTACGGTATCGGCCCGTATGAAGGACTTCGGTTCTTCAGTTCCGCCATTGCTGCCCCTCGCAGCATGTGGCAGACCATTGCAGTACCTACGGCATTGGGCGGGCTTGTTGACTATGGGATGACCGCGGAAGTGTCATTCCAGATCAGCTCTCCTGCAGCACCTGACGTCCACTGCATCCATGTAAATGCTACATTCGAAGATGCATACGGTAACCCAATTGCGGGAAGGTACTCTCGCCGCTTCGCCGCAACGACAACCAATACATGGGAAGCACAGACAGCATTTATTCCTATCCCAGTAGGCGCGCGCGTCGTCACAGTTTACTTTGAATACTACCAGCGCCTTGCAGCCAGCCGCACAAACATCGACGCTATCTCTGTGGCTTGGGTGTCTAACCCGGATGAGGTCTCCGCTGATCGCAGCCGCACATACGCAGTTCTTGGGGCATCTCCTAATGCTGTCAATGTCCAGCGTCAGCGCACGTATGCGGTATTTGGCCGTCATCCTGAAATCCTTGCGGTAAATCAGCACCGCACCTATGTAATCTTGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b7b5a5d4197a919b9094dca1ce1e10171e5692670b7b154e36821afecf2022f8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6831
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse roseophage infecting Ruegeria pomeroyi DSS-3 Zhan,Y., Chen,F., Wommack,E. and Nasko,D. 2018-09-27 — GenBank