Protein

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Genbank accession
YBB95275.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MALNFTTITENNVIRDLTTQVNNIGEELTKERNIFDITDDLVYNFNKSQKIKLTDDKGLTKSYGNITALRDIKEPGYYYIGARTLATLLDKPDMESIDVVLHVVPLDTSSKVVQHLYTLSTSNNQIKMLYRFVSGNSSSEWQFIQGLPSNKNAVISGTNILDISSPGVYFVMGMTGGMPSGVDSGFLNLSVDANDNRLARLTDAETGKEYTSIKKPTGVYTAWKKEFEPKDMEKYLLSSIRDDGSASFPLLVYTSDNKTFQQAIIDHIDRTGQTTFTFYTQGGVSGSPMSNSCRGLFMSDTPNTSSLHGVYNAIGTDGRNVTGSVVGSNWTSPKTSPSHKELWTGAQSFLSVGTTKNLADDISNYSYVEVYTKHKTAEKTKGNDDSGTICHKFYLDGSGTYVCSGTFVSGDRTDTKPPVTEFYRVGVSFKGSTWTLVDSAVQNSKTQYVTRIIGINMP
Physico‐chemical
properties
protein length:458 AA
molecular weight: 50390,75090 Da
isoelectric point:6,01961
aromaticity:0,09607
hydropathy:-0,39563

Domains

Domains [InterPro]
DC_1773
STR
9–247
DC_1773 IPR057110
DC_0448
STR
195–457
DC_0448
YBB95275.1
1 458
Architecture
STR
STR 9-458
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YBB95275.1
1 458
Domain Start End Length (AA) Confidence
N-terminal 1 320 320 0,4550
Central domain 321 447 128 0,0222
C-terminal 448 458 10 0,9943
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-320
Central
321-447
C-terminal
448-458

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage SPB
[NCBI] 		3388613 Viruses > unclassified bacterial viruses >
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YBB95275.1 [NCBI]
Genbank nucleotide accession
PQ777470.1 [NCBI]
CDS location
range 139889 -> 141265
strand +
CDS
ATGGCATTAAATTTTACTACAATAACGGAAAACAATGTTATTAGAGACCTGACTACTCAGGTCAATAACATTGGAGAAGAATTAACAAAAGAAAGAAATATATTTGACATTACAGATGATTTAGTTTATAATTTTAATAAATCACAGAAAATTAAACTAACTGATGATAAAGGATTAACTAAATCTTATGGAAACATAACAGCTCTTAGAGATATAAAAGAACCTGGTTACTATTATATTGGAGCTAGAACATTAGCAACGTTATTAGATAAGCCTGACATGGAGTCTATTGATGTTGTATTACATGTAGTACCACTTGATACTTCTAGTAAAGTAGTTCAACATTTATACACATTATCTACTAGCAATAATCAAATTAAAATGTTATATAGATTTGTCTCAGGAAACTCCAGTTCAGAATGGCAATTTATTCAAGGATTACCTAGTAATAAAAATGCTGTTATATCAGGTACTAATATTTTAGATATATCTTCACCAGGTGTTTATTTTGTTATGGGAATGACAGGAGGTATGCCTAGTGGTGTAGATTCAGGTTTTTTAAATTTAAGTGTAGATGCTAATGACAATAGACTAGCTAGGTTAACTGACGCTGAAACTGGTAAAGAGTACACTAGTATTAAGAAACCTACAGGAGTATACACAGCCTGGAAAAAAGAATTTGAACCAAAAGATATGGAGAAATATTTATTAAGTAGTATTAGAGACGATGGTAGTGCATCATTTCCACTTCTAGTTTACACTAGTGATAATAAAACATTCCAACAAGCTATTATAGACCATATAGATAGAACAGGTCAAACAACTTTTACTTTCTACACTCAAGGTGGTGTATCAGGTTCACCTATGTCTAATAGTTGTCGAGGATTATTCATGTCTGATACACCTAACACATCTAGTTTACATGGAGTATATAATGCAATAGGTACAGACGGTAGAAATGTAACAGGTTCAGTAGTAGGTAGTAATTGGACTTCACCAAAGACATCACCTTCTCATAAAGAATTATGGACGGGAGCACAATCATTCTTATCTGTAGGTACTACTAAGAATCTAGCAGATGACATTAGTAATTATTCTTATGTAGAGGTTTATACTAAACATAAGACAGCAGAGAAGACTAAAGGTAATGATGATTCAGGTACAATTTGTCATAAATTCTACTTGGATGGTAGTGGTACCTACGTTTGCTCAGGAACTTTTGTTTCAGGAGATAGAACAGATACAAAACCACCCGTTACAGAATTCTATAGAGTAGGTGTGTCCTTTAAAGGTTCAACATGGACTCTTGTAGATAGTGCAGTACAAAATAGTAAAACTCAATACGTTACAAGAATTATAGGTATTAATATGCCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
93549597817fd6fc1df4add4ef706dc59b88a89e3c29ef128085bb44145d96c6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8279
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50