Protein

View in Explore
Genbank accession
XNX25287.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAPKDHYTVGLSSLFLRFFDGICSGPLLTTAPEVVPVVILVGFPPASPATISSLIKSLNVFITPPFRXXXXXXXXXXXXTKSDQGQIIDLGFAKGGQVDGDVTINGTLRINGPLNNFGNFSTSGSITAGTSISAQTFRALQGSFYSRASNDTTSNAHLWFENADGSERGVIYARPQTTNAGELRIRIKQGTEGTANSEFYFRSINGGEFQANRILASDSLVTKRIAVDTVIHGGKAFGVYDTDSLVNYVYPGTGETNGVNYLRKVRAKSGGTMWHELCTAQTGQADEMSWWTGNTPSSKQYGIRNDGRMAGRNSLALGTFTTGFPSSDYGNVGVMGDKYLVLGDTVTGLKYIKQGVYDLVGGGYSVASITSDGFRGTSKTIFGRSNDQGLTWLLPGQNSSMVSIRTEIDGNNSGDGQTHLGYNSNGKLYHYFRGTGRVAISMAEGMIIEPGILNIKTGVNELNLRADGTVSSTQPVKLDNELFFNTNNNNKGIKFGASSTINGTKTIVWNAGTRPGQNKSYVTMKVWGNAFEDDTNKSRETVFELGDGQGWHFYSQRVAPTSSQTVGSIQFRVNGGLTTAGSISSEGSITSANGLNINGGATFNGQVKIGGTADALRIWNAEYGMIFRRSETGSSASFHLIPTLQNAGENGGISDLRPLSINLATGTVIMGNKSAGYGPLFTVDNVSKFVQTDCRLRVNMDSDAIVVNASSQASSNFIQGRKADVTKWYLGIGDGGNVVRLHNYTYSHGIALNSDTVDITKALKIGSDVRIGPDGNITGSTALDNFKNLNTTLDRKVNTGGWAGGATTGWYKFATVEIPQATGTASFKISGGSGFNFKSYGQASIAEIVLRTGNNNPKGLNATLWNRTSEAISQIASVNTSEDTYDIYVYLGGYSNSLAVEYTCSSNSKVTVVGINSGVQPLVETLPEGHVVGKSVRMLNNIDGMFAAGESDIVTRGEYVTNNQKGMRIKSSGNDIGSNAALIRNDGENFHILVTDKNTEENPNATDGLWNGLRPFSINMADGRVGMGSGLNITGGGLNVAGGLNVTSGNTSLGNISSRVVAGWRGASGWGDTSDTMKSKITFMADHGDLSNSGSYYPIVGAYSNYGSSGYRQTFEFGWVGSGTTAGWREGIIRIRGDNANGQQARWRFTMDGILDCPGKVQMPQTSAFGVNTTNSLGGSSITIGDSDTGIKQNGDGLLDIYANGVQTFRFQNGDLYSYKNINAPNVYIRSDIRLKSNFRPIENALEKVEQLDGLIYDKAEYIGGEAVQTEAGVIAQNLKEVLPEAVHESLDSQENMVLTVSTQAQVALLIEAVKTLSAKVRELEAKLN
Physico‐chemical
properties
protein length:1329 AA
molecular weight: 140455,53370 Da
isoelectric point:6,45364
aromaticity:0,08504
hydropathy:-0,28595

Domains

Domains [InterPro]
DC_1954
STR
70–1329
DC_1954
G3DSA:6.20.80.10
STR
703–761
G3DSA:6.20.80.10 IPR030392 Coil
IPR048388
ATT
705–784
IPR048388 IPR030392
XNX25287.1
1 1329
Architecture
STR
ATT
STR
STR 70-704 | ATT 705-784 | STR 785-1329
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNX25287.1
1 1329
Domain Start End Length (AA) Confidence
N-terminal 1 194 194 0,3876
Central domain 195 393 200 0,6150
C-terminal 394 1329 935 0,6797
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-194
Central
195-393
C-terminal
394-1329

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage DCP80
[NCBI] 		3396873 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNX25287.1 [NCBI]
Genbank nucleotide accession
PQ671644 [NCBI]
CDS location
range 85252 -> 89241
strand -
CDS
ATGGCCCCGAAGGACCATTATACTGTAGGTTTATCGTCTTTGTTCTTACGCTTTTTTGATGGGATTTGTTCAGGGCCTTTATTGACAACTGCCCCGGAAGTGGTACCTGTTGTGATATTAGTTGGGTTTCCACCTGCATCACCTGCAACCATATCTTCGTTGATAAAATCTTTGAATGTTTTCATAACACCCCCTTTCCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTAAGTCAGACCAGGGACAGATTATTGATTTGGGCTTTGCTAAAGGTGGGCAGGTTGACGGGGATGTAACTATTAATGGAACTTTACGCATTAACGGCCCATTAAACAATTTTGGAAACTTTTCTACAAGCGGGTCGATTACAGCAGGCACTAGTATTTCGGCTCAAACTTTTAGAGCGTTGCAAGGCTCGTTTTATTCAAGAGCTTCAAACGATACAACATCAAATGCCCATTTATGGTTTGAAAATGCTGATGGCAGTGAACGCGGTGTTATATATGCACGTCCTCAAACTACAAATGCTGGTGAATTACGCATTAGGATTAAACAGGGGACAGAAGGTACTGCTAATAGTGAATTCTATTTCCGTTCTATAAATGGTGGTGAATTTCAGGCCAACCGTATTTTAGCATCAGATTCATTAGTAACTAAACGCATTGCAGTCGATACAGTTATCCACGGTGGCAAAGCCTTTGGTGTATATGATACAGATTCATTAGTTAATTATGTATACCCAGGCACAGGCGAAACGAATGGTGTAAACTATCTTCGTAAAGTTCGCGCCAAGTCTGGTGGCACTATGTGGCATGAGCTTTGCACCGCCCAGACAGGTCAAGCTGATGAAATGTCATGGTGGACAGGTAATACTCCATCATCTAAACAATATGGCATTCGTAATGACGGACGAATGGCAGGCCGTAATAGCCTTGCATTAGGTACATTCACTACGGGTTTCCCGTCTAGTGATTATGGTAACGTCGGTGTAATGGGCGATAAGTATCTTGTTCTCGGTGACACTGTAACCGGTCTGAAATATATTAAGCAAGGTGTTTATGATTTAGTTGGTGGAGGTTATTCCGTTGCATCTATTACTTCCGACGGCTTCCGTGGGACTAGTAAAACCATATTTGGCCGTAGTAATGACCAAGGTCTTACTTGGCTTCTGCCTGGCCAGAACTCTTCTATGGTTTCTATTAGAACCGAAATAGACGGTAATAACTCTGGGGATGGCCAAACCCATTTAGGTTATAATTCTAATGGTAAACTTTATCATTATTTCCGTGGTACAGGTCGTGTAGCCATTTCTATGGCAGAAGGCATGATTATTGAACCAGGTATTTTGAATATTAAAACCGGGGTTAATGAACTGAATCTTAGAGCCGATGGCACAGTTTCCTCGACCCAACCAGTTAAATTAGATAACGAATTATTTTTTAATACTAACAACAACAATAAAGGTATAAAGTTCGGCGCTTCTTCCACTATCAATGGCACAAAAACGATTGTTTGGAACGCAGGCACCCGCCCGGGTCAGAACAAAAGCTATGTGACCATGAAAGTATGGGGTAACGCATTTGAGGATGACACTAATAAAAGCAGAGAAACTGTATTTGAATTAGGCGATGGACAGGGTTGGCATTTTTATTCACAACGCGTTGCTCCCACAAGTTCCCAAACCGTAGGTTCTATTCAATTCCGTGTAAATGGTGGATTGACTACTGCTGGTAGTATTTCATCGGAAGGTAGTATCACTTCAGCAAACGGATTGAATATAAATGGTGGCGCCACTTTTAACGGTCAAGTTAAAATAGGCGGTACCGCTGATGCATTAAGAATTTGGAATGCCGAATATGGTATGATTTTCCGTCGTTCAGAAACAGGTTCTTCTGCTTCATTCCATCTTATTCCTACTCTTCAGAACGCTGGAGAAAATGGTGGAATAAGTGACCTTCGTCCGCTATCTATCAATTTAGCCACCGGCACGGTTATAATGGGGAATAAAAGTGCCGGGTATGGTCCACTTTTTACAGTAGACAACGTAAGTAAATTTGTCCAGACCGACTGTAGACTGCGTGTTAATATGGATTCTGATGCCATTGTGGTAAATGCTTCATCCCAGGCATCATCCAACTTTATCCAAGGACGTAAAGCAGATGTTACAAAATGGTATCTCGGTATTGGCGACGGCGGCAACGTTGTTCGTTTACATAACTATACATACTCCCATGGTATTGCATTAAACTCTGATACTGTTGATATAACCAAGGCACTTAAAATTGGTTCCGATGTTCGTATTGGTCCTGACGGTAATATTACAGGCAGCACTGCATTAGATAACTTTAAAAACCTGAACACAACGTTAGACCGTAAAGTTAACACAGGCGGTTGGGCTGGCGGCGCTACTACAGGTTGGTATAAATTTGCTACTGTAGAAATTCCACAAGCGACGGGTACAGCATCCTTTAAAATATCAGGTGGTTCTGGATTTAATTTTAAAAGTTATGGTCAGGCTTCAATAGCCGAAATAGTCCTTAGAACCGGCAATAATAACCCTAAAGGCCTTAATGCTACGCTGTGGAATAGAACTTCTGAAGCTATTTCTCAGATTGCTTCTGTTAATACAAGCGAAGATACCTATGATATTTACGTTTACTTAGGTGGGTATTCTAATTCTTTGGCGGTAGAATATACATGCAGTAGCAATAGTAAAGTAACCGTAGTGGGTATTAATAGCGGTGTCCAGCCTTTGGTAGAAACATTACCTGAAGGTCATGTTGTAGGTAAATCTGTAAGAATGCTGAACAACATTGACGGAATGTTTGCTGCCGGCGAATCGGATATTGTTACACGTGGTGAATACGTTACCAATAACCAAAAAGGTATGCGTATCAAATCCAGCGGTAATGATATAGGTTCTAATGCCGCTTTGATTAGAAACGACGGTGAAAATTTTCATATTTTAGTTACGGATAAAAACACGGAAGAAAACCCGAATGCAACTGACGGGTTGTGGAATGGCTTAAGACCTTTCTCTATCAACATGGCTGATGGTCGTGTAGGCATGGGCAGTGGTCTGAATATTACTGGTGGTGGTCTGAACGTGGCGGGCGGCCTTAATGTCACCAGTGGTAATACTAGTTTAGGCAATATCTCGTCTCGTGTGGTTGCAGGTTGGCGCGGTGCCTCTGGTTGGGGAGATACCTCAGATACAATGAAATCTAAAATCACCTTTATGGCAGACCATGGTGATTTATCTAATTCAGGTAGTTATTATCCTATTGTAGGTGCATACAGCAACTATGGTTCCTCTGGATATCGTCAAACCTTTGAATTTGGATGGGTCGGCTCTGGTACCACAGCTGGTTGGCGAGAAGGTATTATTCGTATTCGCGGAGATAACGCTAACGGCCAACAAGCAAGATGGCGATTTACAATGGATGGCATTTTAGATTGCCCGGGTAAAGTACAGATGCCACAAACAAGTGCCTTTGGTGTTAATACAACTAACTCACTCGGTGGAAGTAGTATAACAATTGGCGATAGTGATACCGGTATTAAGCAAAATGGCGATGGATTATTAGACATATATGCGAATGGCGTACAGACTTTCCGTTTCCAAAACGGTGATTTGTACTCATATAAAAATATAAATGCTCCAAACGTTTATATTCGTTCTGACATTCGTTTGAAATCAAACTTCAGGCCTATTGAAAATGCTCTTGAAAAGGTTGAACAGCTCGACGGTTTAATCTATGATAAAGCTGAATATATCGGTGGTGAAGCGGTTCAAACTGAAGCAGGTGTTATTGCTCAGAATCTTAAAGAAGTATTACCTGAAGCGGTGCATGAGTCTTTAGATTCGCAGGAAAATATGGTTCTGACAGTTTCGACTCAGGCACAAGTTGCTCTGTTAATTGAAGCAGTTAAAACCCTGTCGGCTAAAGTTAGAGAACTTGAAGCTAAATTAAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
920f995ead52a1e81ae5cfad69a632b86ec1e5a0d21fafa91d942e7985761028
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6719
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50