Protein

View in Explore
Genbank accession
WPK29146.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MNGATAGSNIAKTSSEGNHTHSWSGTTSTTGNHAHTVGIGAHTHSVGIGAHSHTVAIGSHGHTITVNATGNTENTVKNVAFNYIVRLA
Physico‐chemical
properties
protein length:88 AA
molecular weight: 8896,51190 Da
isoelectric point:8,40779
aromaticity:0,03409
hydropathy:-0,27955

Domains

Domains [InterPro]
DC_0163
STR
2–88
DC_0163
IPR051934
Unmapped
6–88
IPR051934
SSF88874
STR
12–87
SSF88874
IPR005003
Unmapped
14–27
IPR005003 IPR005003 IPR005003
WPK29146.1
1 88
Architecture
STR
STR 2-88
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPK29146.1
1 88
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0005
Central domain 11 77 68 0,0017
C-terminal 78 88 10 0,9974
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-77
C-terminal
78-88

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP_EP32B
[NCBI] 		3090673 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK29146.1 [NCBI]
Genbank nucleotide accession
OR544955.1 [NCBI]
CDS location
range 150105 -> 150371
strand -
CDS
GTGAACGGTGCTACTGCAGGGTCGAATATAGCCAAAACTTCTTCAGAAGGTAACCATACACACTCTTGGTCAGGAACCACAAGTACCACGGGTAACCATGCTCATACTGTGGGTATTGGCGCTCATACCCATTCGGTAGGTATTGGTGCTCATTCTCATACTGTTGCAATTGGTTCCCATGGACATACAATAACTGTAAATGCCACAGGAAATACAGAAAACACAGTTAAAAACGTTGCTTTTAACTATATCGTTCGTTTAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
abff06b695534dc3c6880bfbf990275a0f4a5e5a9080096711319602984d59c3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6270
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequencing of NWU_EP_32a Oluwarinde,B.O., Montso,P.K. and Ateba,C.N. 2024-10-22 — GenBank