Protein

View in Explore
Genbank accession
AUS02849.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MVQYAHKGDNMSNNRSLYKKLVAEKNKRLDDSNLENGLYIFPNGSVVNVVDGVQTILGESGDISGGVVIPNVTTLERDALTEASDGLVVFNTDTDELHMYTTDGSQGAWAYIEHRVCYAHAWVEDQNTTLTPTTGDVSEYTKIVTGASTGFSTTFIRNFDQNSVDGSLTYTGPDASGTPVYIDAKIVCTSGAGGTDEYRINVFKNGSPITIPTIFSTRGVNNVNSESLFAVTSLSTGDVIDVRVSGDNTEGLVVQYADFVIR
Physico‐chemical
properties
protein length:262 AA
molecular weight: 28210,73340 Da
isoelectric point:4,44847
aromaticity:0,08397
hydropathy:-0,21107

Domains

Domains [InterPro]
IPR059888
RBD
64–112
IPR059888
DC_1224
STR
70–262
DC_1224
AUS02849.1
1 262
Architecture
STR
STR 64-262
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 2.275.O._10N.286.54.E11
[NCBI] 		1881285 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUS02849.1 [NCBI]
Genbank nucleotide accession
MG592671.1 [NCBI]
CDS location
range 152378 -> 153166
strand -
CDS
TTGGTGCAATACGCACACAAAGGAGATAATATGAGTAATAATCGATCATTATACAAAAAATTAGTGGCAGAAAAAAATAAAAGACTGGATGATAGTAATTTAGAGAATGGTCTTTATATTTTTCCAAACGGTAGCGTGGTTAATGTTGTTGATGGCGTGCAAACTATTTTAGGGGAATCAGGAGACATATCAGGAGGTGTTGTGATCCCTAACGTAACTACGTTAGAACGCGATGCCCTAACTGAAGCATCTGATGGTCTAGTTGTATTTAATACTGATACGGATGAGCTCCACATGTATACTACTGACGGATCTCAAGGAGCATGGGCATACATAGAGCACCGAGTATGCTACGCACATGCATGGGTTGAAGATCAAAACACAACACTAACACCAACAACAGGCGATGTTAGCGAATATACAAAAATAGTTACTGGTGCTAGTACTGGGTTCTCAACAACATTTATAAGAAATTTTGATCAAAATAGCGTTGACGGATCTCTCACATACACCGGTCCTGATGCTAGTGGCACGCCAGTATACATCGATGCAAAAATAGTTTGTACTTCTGGCGCTGGTGGCACTGATGAATACCGAATTAATGTGTTTAAGAATGGATCGCCTATCACGATTCCTACTATTTTCTCAACTCGTGGAGTGAATAATGTTAATTCAGAATCATTGTTTGCAGTAACGTCATTAAGCACTGGCGATGTTATTGATGTTAGGGTATCAGGGGATAACACTGAAGGACTAGTTGTCCAATATGCGGATTTTGTTATTAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e96e67fc2db2b3f9fcb3f99deff1c1a018c29d5a6f9eb8a2062eb8bc570b1ad2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5288
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank