Protein

View in Explore
Genbank accession
WJZ48254.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,59
Protein sequence
MANNRELSQLASLITVNDSTTAIGINTSVGIGTTNPSQSLHVQGNARITGGIYDSNNAVGAASSILVSTGSGVAWTAPFAAGIQGLQGTTGAQGTTGTQGTTGTQGTTGTQGTTGTQGTTGTQGATGTQGTTGTQGATGTQGTTGTQGTTGTQGTTGTQGTTGTQGTTGTQGTTGTQGTTGTQGATGTQGTAGPSTTINATDDTSDTSLFPVLVTSTGSQTAKVATTNNFIYNAASNRLALGISNPAAAFQIVGLGGNDSGIRLFDTTAVGGDVSGSGFNIYHEAGNSINQGLFIDSGGNKFQHDGINLLLISQAGSGALSNIYTQASAITPAVQQYSTGTNGATFSITRDGGGIPTLVFNRAAAGPAIVAEGNGCGIIYFNGYDGANYRTAARIYGEVDGTPGSADMPGRIVFDTSPDGTAVTTEKFRIASDGTLFYNQPTPTSKSGAATLTVAELRTGIINYTGGAATLTLPTGTDTQTGISGIYTNITFEWSVINTGSGTCTIGNGTAHTVTGLNTVAASTSGRFATRRTASNTFVSYRIA
Physico‐chemical
properties
protein length:544 AA
molecular weight: 53917,82140 Da
isoelectric point:5,14736
aromaticity:0,05882
hydropathy:-0,17059

Domains

Domains [InterPro]
DC_1453
STR
2–146
DC_1453
IPR050938
Unmapped
76–200
IPR050938
IPR008160
STR
82–140
IPR008160
DC_0804
STR
123–301
DC_0804
WJZ48254.1
1 544
Architecture
STR
STR 2-301 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WJZ48254.1
1 544
Domain Start End Length (AA) Confidence
N-terminal 1 190 190 0,8467
Central domain 191 389 200 0,0657
C-terminal 390 544 154 0,9870
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-190
Central
191-389
C-terminal
390-544

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage DSL-LC02
[NCBI] 		3058947 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJZ48254.1 [NCBI]
Genbank nucleotide accession
OR032571.1 [NCBI]
CDS location
range 43089 -> 44723
strand -
CDS
ATGGCTAATAACAGAGAATTATCTCAACTTGCATCTTTAATAACCGTTAATGATTCTACAACAGCTATTGGGATCAACACCTCTGTCGGCATAGGAACCACAAATCCATCACAATCTTTACATGTTCAAGGTAATGCTAGAATTACTGGTGGAATCTATGACTCCAATAATGCTGTTGGTGCAGCAAGTTCAATTTTAGTTTCAACTGGATCTGGAGTTGCTTGGACTGCTCCTTTTGCTGCAGGTATACAAGGGCTTCAAGGTACTACGGGTGCTCAAGGAACCACAGGCACTCAAGGTACTACTGGAACTCAAGGAACTACAGGAACTCAAGGCACAACAGGAACTCAAGGCACAACAGGAACCCAAGGTGCTACGGGAACTCAAGGCACAACAGGAACTCAAGGTGCTACGGGAACTCAAGGAACCACTGGAACTCAAGGCACAACAGGAACTCAAGGCACAACAGGAACCCAAGGAACTACAGGAACTCAAGGCACAACAGGAACTCAAGGCACAACAGGAACTCAAGGCACAACAGGAACCCAAGGTGCTACGGGAACTCAAGGAACTGCAGGCCCTTCAACTACAATTAATGCTACTGATGATACTTCAGATACAAGTCTGTTCCCAGTATTGGTTACTTCAACAGGTTCTCAAACTGCTAAAGTAGCAACTACAAACAATTTTATTTACAATGCTGCTTCTAATAGATTAGCTTTAGGAATTTCCAATCCAGCTGCTGCTTTTCAAATTGTCGGTTTAGGAGGCAATGACAGTGGGATTAGATTGTTTGATACTACAGCAGTAGGTGGGGATGTAAGTGGATCTGGATTTAATATCTATCATGAAGCAGGCAATTCAATCAATCAAGGGCTCTTTATTGACTCTGGTGGTAATAAATTTCAACACGATGGCATCAATCTATTGTTAATTAGTCAAGCTGGAAGTGGTGCATTATCTAACATTTACACCCAAGCCAGTGCTATCACTCCTGCTGTTCAACAGTATTCAACTGGTACTAATGGAGCTACTTTTTCAATAACTCGTGATGGAGGTGGAATCCCAACACTGGTTTTTAATAGAGCAGCAGCAGGCCCTGCTATTGTTGCAGAGGGTAATGGCTGTGGAATAATTTATTTTAATGGATATGATGGTGCTAACTACAGAACTGCCGCAAGAATCTATGGAGAAGTGGATGGAACCCCAGGCTCGGCAGATATGCCTGGACGTATTGTTTTTGATACATCGCCAGACGGCACAGCAGTAACCACAGAAAAATTTCGTATTGCTAGTGATGGAACACTTTTTTACAACCAACCAACACCAACATCTAAAAGTGGTGCTGCAACCCTTACCGTTGCAGAATTGAGAACAGGAATTATTAATTATACTGGTGGTGCTGCTACACTAACATTACCTACTGGAACTGATACTCAAACTGGAATTTCTGGTATTTATACCAACATAACTTTTGAATGGAGTGTCATAAATACTGGATCTGGAACCTGCACCATTGGAAATGGAACAGCTCATACTGTAACTGGATTAAATACAGTCGCTGCCAGCACTTCAGGTAGATTTGCTACTCGACGAACTGCCTCCAACACATTTGTCTCTTATAGAATTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cdfff0b89cd195b19971c62bcec0465bc6746ed437b93f3e89f0853b9967b80d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6406
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50