Protein

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Genbank accession
XPP57002.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MGFGPAYGTGRGGGAVDIFTKKDGNPAIFANTGARDTYFTTNPDELAKVKSSGNAVAIGTTDQVTAAYVYKGNAWQAIATNFKGDKGAPGAPGDGIDYSHLRDNQLPKWDSKTKMFVSSGVRSLEDGSISLEPASMHLGSHTISSSAENVTFTNIVTRKTYSPLWQEVAPGAKTGYIRAHGEYQDVILEADGSVDLLNPSFIYTAPTDASLFGATIELSRDATNVEVHVEFNNEELWLARLGDLSAGERKILFSNPADFKMGNNYRVIIDSSDGSEVILKGNNFNTPKATLHAAKWEDRVVTSMREGALGTGDVPVWSEKENEFIKNSLSVTPAGGLEVSADGVKLGTTKVTSSSSGLTFNSDLDLYSYKPIVQAVEEDSTAVYSRIYKDSEDFEVNTTIGKEILSPIVSYTPTENVTLTALKIHLSKDASVLRVSIFQGLREVSTIVETNVSAGQHILQLEDYPDLKANTEYRLAFTGTNKDGTTDFKLVGDSLPYLVISTIPWSGHELASRSWVSDQIKAVAHGTDKFLVERTASPTYYVPADKAFEQRTTFIYSGVENGRFILPDISNPANHPGGSLLLLKNESSTSSPLTVVTSAGAGLNTRSVTSASVPFSHVMLFIADISNNIWIMLPLVGGGTGGQTLDTDKVVKKLELVYLVISWL
Physico‐chemical
properties
protein length:664 AA
molecular weight: 71544,18550 Da
isoelectric point:5,12519
aromaticity:0,08584
hydropathy:-0,18855

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPP57002.1
1 664
Domain Start End Length (AA) Confidence
N-terminal 1 397 397 0,9626
Central domain 398 596 200 0,1293
C-terminal 597 664 67 0,2127
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-397
Central
398-596
C-terminal
597-664

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Luma
[NCBI] 		3388592 Viruses >
Host Vibrio campbellii
[NCBI] 		680 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPP57002.1 [NCBI]
Genbank nucleotide accession
PQ768828.1 [NCBI]
CDS location
range 88232 -> 90226
strand +
CDS
ATGGGATTTGGCCCAGCCTATGGTACTGGTAGGGGCGGTGGAGCAGTAGACATCTTTACTAAAAAAGATGGAAACCCTGCCATTTTCGCCAATACTGGTGCTAGAGACACATACTTTACAACAAACCCTGATGAATTAGCTAAAGTAAAATCATCAGGTAATGCAGTAGCAATAGGTACTACTGACCAAGTAACAGCTGCCTACGTATATAAAGGTAACGCATGGCAAGCAATCGCAACTAACTTCAAAGGTGACAAAGGTGCACCTGGAGCACCTGGTGATGGTATTGACTACAGCCACCTAAGAGATAATCAACTGCCTAAGTGGGACTCGAAAACTAAGATGTTTGTTAGTTCCGGTGTACGCTCCCTAGAAGATGGCTCTATCTCCCTAGAACCAGCATCAATGCACTTAGGCTCTCACACTATTTCTAGCAGTGCTGAGAACGTAACATTCACTAATATTGTTACACGAAAAACATACTCACCTTTATGGCAAGAGGTAGCGCCAGGGGCTAAGACAGGATATATTAGAGCTCATGGTGAGTACCAAGATGTAATACTAGAGGCTGATGGTTCTGTTGACTTACTGAATCCATCATTTATATACACAGCACCTACAGATGCATCTCTATTTGGTGCTACAATAGAGTTATCAAGGGATGCTACAAATGTAGAGGTACATGTAGAGTTCAATAATGAAGAACTATGGTTAGCTAGGCTCGGTGATCTATCGGCAGGTGAAAGAAAAATATTATTCAGTAATCCCGCTGACTTCAAAATGGGGAATAATTACAGGGTAATAATTGATAGCTCTGATGGGTCTGAGGTTATTCTAAAAGGTAATAACTTCAACACACCAAAAGCAACCCTCCATGCAGCGAAATGGGAAGATAGGGTAGTCACTTCTATGAGAGAAGGAGCACTAGGAACCGGCGATGTCCCAGTATGGTCTGAGAAAGAAAATGAGTTTATAAAAAATAGTCTAAGCGTTACTCCTGCTGGAGGCTTGGAAGTTAGCGCAGATGGAGTAAAATTAGGTACTACAAAAGTAACTTCTTCATCCTCTGGTCTAACATTTAACTCAGACCTAGACCTATACTCTTATAAACCTATAGTACAAGCTGTAGAAGAAGACTCAACGGCTGTATACTCCAGAATCTATAAAGATTCTGAGGATTTCGAGGTAAATACTACAATAGGTAAGGAGATACTATCTCCTATAGTATCGTATACCCCAACAGAAAATGTGACACTAACTGCACTAAAAATACATTTATCTAAAGATGCTTCAGTACTTAGAGTGAGCATTTTCCAAGGACTTAGAGAGGTATCAACAATTGTTGAAACTAATGTATCTGCAGGACAGCATATACTCCAGTTAGAGGACTATCCTGACTTAAAAGCAAATACAGAATATAGGTTAGCGTTTACAGGTACTAATAAAGATGGCACTACTGATTTTAAATTAGTTGGGGATTCATTACCTTATTTAGTAATAAGTACAATACCTTGGTCTGGACATGAGTTAGCGAGTAGAAGTTGGGTTTCTGATCAAATCAAGGCTGTGGCTCATGGTACAGATAAGTTCTTGGTAGAAAGAACAGCATCACCAACATATTATGTACCGGCTGATAAGGCATTTGAGCAAAGAACCACATTTATCTATTCTGGAGTAGAGAATGGTCGTTTTATTCTACCAGATATTAGTAATCCTGCGAATCACCCAGGTGGGTCTCTTCTTTTACTAAAAAATGAGTCTAGTACTAGTAGCCCACTAACTGTAGTAACGTCGGCTGGGGCAGGACTAAATACTAGATCTGTAACATCAGCTTCAGTACCATTTAGTCACGTGATGTTATTTATAGCAGATATAAGTAATAACATTTGGATAATGCTACCTCTAGTAGGTGGTGGAACTGGTGGGCAAACACTAGATACAGATAAGGTGGTAAAAAAGTTGGAACTAGTGTATCTGGTAATCAGTTGGTTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
db53411e3d9993b44afad83ae79f02461a5625b41c2729f4dc93721c3f451aef
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6842
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50