Protein

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Genbank accession
AAQ92754.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,72
Protein sequence
MKKILDSAKNYLNTHDKLKTACLIALELPSSSGSAATYIYLTDYFRDVTYNGILYRSGKVKSISSHKQNRQLSIGSLSFTITGTAEDEVLKLVQNGVSFLDRGITIHQAIINEEGNILPVDPDTDGPLLFFRGRITGGGIKDNVNTSGIGTSVITWNCSNQFYDFDRVNGRYTDDASHRGLEVVNGTLQPSNGAKRPEYQEDYGFFHSNKSTTILAKYQVKEERYKLQSKKKLFGLSRSYSLKKYYETVTKEVDLDFNLAAKFIPVVYGVQKIPGIPIFADTELNNPNIVYVVYAFAEGEIDGFLDFYIGDSPMICFDETDSDTRTCFGRKKIVGDTMHRLAAGTSTSQPSVHGQEYKYNDGNGDIRIWTFHGKPDQTAAQVLVDIAKKKGFYLQNQNGNGPEYWDSRYKLLDTAYAIVRFTINENRTEIPEISAEVQGKKVKVYNSDGTIKADKTSLNGIWQLMDYLTSDRYGADITLDQFPLQKVISEAKILDIIDESYQTSWQPYWRYVGWNDPLSENRQIVQLNTILDTSESVFKNVQGILESFGGAINNLSGEYRITVEKYSTNPLRINFLDTYGDLDLSDTTGRNKFNSVQASLVDPALSWKTNSITFYNSKFKEQDKGLDKKLQLSFANITNYYTARSYADRELKKSRYSRTLSFSVPYKFIGIEPNDPIAFTYERYGWKDKFFLVDEVENTRDGKINLVLQEYGEDVFINSEQVDNSGNDIPDISNNVLPPRDFKYTPTPGGVVGAIGKNGELSWLPSLTNNVVYYSIAHSGHVNPYIVQQLENNPNERMIQEIIGEPAGLAIFELRAVDINGRRSSPVTLSVDLNSAKNLSVVSNFRVVNTASGDVTEFVGPDVKLAWDKIPEEEIIPEIYYTLEIYDSQDRMLRSVRIEDVYTYDYLLTYNKADFALLNSGALGINRKLRFRIRAEGENGEQSVGWATI
Physico‐chemical
properties
protein length:949 AA
molecular weight: 107164,75280 Da
isoelectric point:5,32345
aromaticity:0,11275
hydropathy:-0,44215

Domains

Domains [InterPro]
DC_0187
STR
230–946
DC_0187
IPR032876
ATT
601–686
IPR032876
AAQ92754.1
1 949
Architecture
STR
ATT
STR
STR 230-600 | ATT 601-686 | STR 687-946 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAQ92754.1
1 949
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9462
Central domain 313 525 214 0,3791
C-terminal 526 949 423 0,0025
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-525
C-terminal
526-949

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage T5
[NCBI] 		2695836 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus T5
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAQ92754.1 [NCBI]
Genbank nucleotide accession
AY543070.1 [NCBI]
CDS location
range 88551 -> 91400
strand -
CDS
ATGAAGAAAATACTCGATAGTGCTAAAAATTACCTGAATACCCATGATAAATTAAAGACAGCATGTCTTATAGCTCTTGAATTGCCAAGTTCATCTGGTTCCGCAGCTACTTATATCTACTTAACAGATTATTTTAGAGATGTTACATATAATGGTATTTTGTACAGATCAGGTAAAGTAAAAAGTATAAGCTCCCATAAACAGAACCGTCAATTATCTATTGGTAGTCTATCCTTCACAATAACTGGTACTGCCGAAGATGAGGTACTAAAGCTAGTTCAAAATGGAGTATCTTTCCTAGATAGGGGTATAACTATCCATCAGGCAATAATCAATGAAGAAGGAAATATTCTTCCTGTAGATCCTGATACAGATGGCCCTTTATTATTCTTCCGCGGTAGAATTACCGGAGGCGGAATAAAAGATAACGTTAATACTTCCGGAATAGGTACATCAGTTATTACTTGGAACTGTTCTAATCAATTTTATGATTTTGATAGAGTAAACGGCAGGTATACAGATGATGCATCTCATAGAGGTCTTGAAGTTGTTAATGGAACTCTTCAGCCATCAAATGGGGCTAAACGTCCTGAGTACCAAGAAGACTATGGATTCTTCCACTCTAATAAAAGTACAACTATTCTAGCTAAATACCAAGTTAAAGAAGAACGATATAAATTACAGTCTAAGAAAAAGTTATTTGGTCTGTCTAGAAGCTACAGCCTTAAAAAATACTATGAGACTGTAACTAAAGAAGTTGACCTAGACTTTAACTTAGCAGCTAAATTTATACCTGTAGTATATGGTGTTCAGAAAATTCCTGGTATACCTATTTTTGCAGATACGGAACTAAATAACCCTAATATAGTATACGTAGTATATGCTTTTGCAGAAGGTGAGATAGATGGATTTCTAGATTTCTATATCGGAGATAGCCCTATGATATGTTTTGATGAAACAGACTCCGATACTAGAACTTGTTTTGGACGTAAAAAGATAGTCGGTGATACAATGCACCGTCTAGCTGCTGGTACAAGTACATCTCAACCTTCTGTTCATGGACAAGAATATAAGTATAACGATGGTAATGGGGATATAAGAATCTGGACCTTTCATGGAAAACCAGACCAGACTGCTGCACAAGTACTTGTAGACATTGCTAAGAAAAAAGGATTTTATCTACAGAATCAGAACGGCAACGGACCGGAATACTGGGATTCTCGTTATAAGTTATTGGATACAGCTTATGCTATAGTTAGATTTACTATTAATGAGAATAGAACTGAAATTCCTGAAATTAGCGCAGAAGTGCAGGGTAAGAAAGTTAAAGTATACAACTCTGATGGTACTATAAAAGCAGATAAGACTAGCTTAAATGGTATCTGGCAACTTATGGATTACCTGACTTCAGATCGTTATGGTGCTGATATTACTTTAGATCAGTTCCCGCTACAAAAAGTAATATCAGAGGCAAAAATACTTGATATAATTGACGAGTCCTACCAGACTAGTTGGCAGCCCTACTGGCGTTACGTTGGGTGGAATGACCCCCTATCTGAGAATCGTCAAATAGTTCAACTAAATACTATACTGGATACTTCTGAATCAGTTTTTAAAAACGTTCAAGGTATATTAGAATCCTTTGGTGGAGCTATAAATAACCTATCAGGTGAGTATAGAATAACAGTAGAAAAATATTCTACGAATCCTCTGAGAATAAATTTTCTAGATACTTATGGAGATTTAGACTTATCTGATACTACTGGTAGAAATAAGTTTAACTCAGTACAGGCATCCTTAGTAGACCCTGCACTAAGCTGGAAAACAAACTCTATTACGTTCTATAACTCGAAGTTTAAAGAGCAGGATAAAGGTCTTGACAAGAAACTTCAGTTATCTTTTGCTAATATTACTAATTACTACACTGCTAGGAGTTACGCAGATAGGGAACTTAAGAAATCTAGATACTCCCGTACTTTAAGTTTTTCCGTACCCTATAAATTTATAGGTATAGAGCCTAACGATCCTATTGCTTTCACATATGAACGTTACGGCTGGAAGGACAAATTCTTCCTGGTTGACGAAGTAGAAAATACTCGTGATGGTAAAATTAATCTAGTCCTCCAAGAGTATGGAGAAGATGTATTTATTAATTCCGAACAGGTAGATAATAGTGGTAATGATATTCCTGATATTAGTAATAACGTTCTACCGCCTAGAGACTTTAAGTACACCCCTACTCCAGGTGGCGTAGTTGGTGCTATAGGTAAGAATGGTGAGCTATCCTGGCTTCCTAGTCTTACAAATAACGTAGTATACTATTCTATTGCACATTCTGGACATGTTAATCCCTACATAGTTCAACAACTGGAAAATAATCCTAATGAGAGAATGATTCAGGAGATTATAGGGGAGCCTGCTGGTTTAGCTATTTTTGAGCTACGCGCAGTAGATATTAATGGTAGACGTAGTTCTCCAGTTACACTATCTGTAGATCTTAACTCCGCAAAGAACTTAAGCGTAGTTAGTAACTTTAGGGTTGTTAATACTGCTTCAGGAGACGTAACTGAATTTGTTGGACCGGATGTTAAACTTGCTTGGGATAAGATTCCAGAGGAAGAAATAATTCCTGAAATTTACTATACTTTGGAAATTTATGATTCTCAAGATAGAATGCTTCGTAGTGTTAGAATAGAAGATGTCTATACCTATGATTATCTATTAACATATAATAAGGCGGATTTTGCTTTACTAAACTCGGGGGCTCTAGGTATCAATCGTAAATTACGGTTTAGAATACGAGCTGAAGGGGAAAACGGAGAGCAATCTGTTGGTTGGGCTACTATTTAA

Genome Context

Genome Context

Tertiary structure

1 / 7
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Virus-induced acquisition of metabolic function. VI. Dihydrofolate reductase, a new phage-induced enzyme Methews,C.K. and Cohen,S.S. 1963 — GenBank
Replication of linear duplex DNA in vitro with bacteriophage T5 DNA polymerase Fujimura,R.K., Das,S.K., Allison,D.P. and Roop,B.C. 1981 — GenBank
The nucleotide sequence of bacteriophage T5 RNAI Kryukov,V.M., Shlyapnikov,M.G., Kazantsev,S.I., Kaliman,A.V., Ksenzenko,V.N. and Bayev,A.A. 1982 — GenBank
Structure of two promoters and a terminator of transcription from the region of bacteriophage T5 early genes D10-D15 Kaliman,A.V., Krutilina,A.I. and Kryukov,V.M. 1987 — GenBank
Amino acid sequence of the bacteriophage T5 gene A2 protein Snyder,C.E. Jr. 1991 — GenBank
Structure peculiarities of transfer RNAs coded by bacteriophage T5 Shlyapnikov,M.G. and Ksenzenko,V.N. 1994 — GenBank
Characterization of the bacteriophage T5 site-specific endonucleases F-TflV and F-TflVI Akulenko,N.V., Shaloiko,L.A., Shlyapnikov,M.G., Krutilina,A.I. and Ksenzenko,V.N. 2004-07 — GenBank
Identification of genes encoding bacteriophage T5 terminase and portal protein Kaliman,A.V., Ganichkin,O.M., Vasiliev,V.D. and Ksenzenko,V.N. 1996-01 — GenBank
Identification and characterization of novel site-specific endonucleases F-TflI, F-TflII and F-TflIV encoded by the bacteriophage T5 Ksenzenko,V.N., Akulenko,N.V., Kaliman,A.V., Kanapin,A.A., Shestakova,N.M., Shaloiko,L.A., Krutilina,A.I., Ivashina,T.V. and Shlyapnikov,M.G. 2004-07 — GenBank
Identification and characterization of bacteriophage T5 lysis genes Mikoulinskaia,G.V. and Zimin,A.A. 2015-01-19 — GenBank