Protein

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Genbank accession
AXF53482.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAVFQFNGYDLNDYFKLIKVSHDVGNERDVTTDSAPKMGVNIQQVSFGAKKIKLTVSLATRDLNDNAFVDPNEPAQIDSGMFHHVREQAARVLHTERPVELKLPDEPDRYYLAIVKGDVTLKGISDWYDQAEIEFLVPDGVAHSTTYRSFENPKIENNKMVFDLVNDGSVNANPIITVKHNSENGYIGLVNSTGICELGDRLEANTEDYRHSEVLFDYASSNGEHRITNGLAQGLKNIGISNDVNDTKPNGTLYIDNAWGRPHIALQSGQVASVTFDIPRDSSGEKGALYEYFWWRQIFWLGSANQMGYLKICVTDASGTFLYGVETFKRYNGLDCEYNFLAGDGKGGFRIVDRKHFLGTHIEQHNPFNEPRGWSDIQRFDDVVQYYWWGSYPRYSIPEIKGKRSDKIHVIFGRVGNYPSVTHMYLDDFFYRKDYVLGVRDIPNRYRAGGKVVIDSETDTVTVDNIPKIVDVVQGSDFLTIPPGKSQLEVYCSSWVTTKPSVSVKFEERYL
Physico‐chemical
properties
protein length:511 AA
molecular weight: 57942,08980 Da
isoelectric point:5,43997
aromaticity:0,11937
hydropathy:-0,45577

Domains

Domains [InterPro]
DC_0077
STR
1–511
DC_0077
G3DSA:2.40.30.200
ATT
2–143
G3DSA:2.40.30.200 IPR054738
IPR008841
STR
11–137
IPR008841
IPR006520
Unmapped
84–143
IPR006520
AXF53482.1
1 511
Architecture
ATT
STR
ATT 1-143 | STR 144-511
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXF53482.1
1 511
Domain Start End Length (AA) Confidence
N-terminal 1 204 204 0,9276
Central domain 205 403 200 0,2185
C-terminal 404 511 107 0,5355
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-204
Central
205-403
C-terminal
404-511

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage 93
[NCBI] 		2268618 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF53482.1 [NCBI]
Genbank nucleotide accession
MH375593 [NCBI]
CDS location
range 14301 -> 15836
strand +
CDS
ATGGCTGTGTTTCAATTCAACGGATATGATTTAAATGATTACTTCAAACTAATCAAAGTGTCGCACGATGTTGGGAACGAACGTGATGTCACTACAGACTCAGCCCCTAAAATGGGGGTTAATATTCAACAAGTTTCGTTTGGTGCTAAGAAAATCAAGCTAACTGTTAGTTTAGCAACTAGAGACCTTAACGATAATGCTTTCGTAGACCCAAACGAGCCCGCTCAAATTGATAGCGGTATGTTTCACCATGTAAGAGAGCAAGCGGCTAGAGTGCTACACACTGAAAGACCTGTAGAGTTGAAACTACCAGACGAGCCAGATAGGTACTATCTAGCGATAGTAAAGGGTGATGTCACTTTAAAGGGCATCTCTGATTGGTATGACCAAGCTGAAATAGAATTTCTAGTTCCTGATGGTGTCGCACATTCAACCACTTACAGAAGTTTTGAAAACCCTAAAATAGAGAACAACAAGATGGTATTTGACCTTGTTAACGATGGATCAGTTAATGCTAACCCAATAATTACAGTGAAGCACAATAGTGAGAATGGCTATATTGGATTAGTTAATAGCACAGGTATCTGCGAGCTTGGGGATAGGTTAGAAGCAAATACAGAAGATTATAGACATTCAGAGGTACTTTTTGATTACGCTTCATCAAACGGAGAGCACAGAATCACTAATGGATTGGCTCAAGGATTGAAAAACATTGGCATCTCAAACGATGTCAACGACACCAAGCCAAACGGAACTCTTTACATCGATAATGCTTGGGGTCGTCCTCACATTGCATTACAGAGTGGCCAAGTAGCATCGGTTACTTTTGACATACCAAGGGATTCAAGCGGTGAAAAAGGTGCGCTATATGAATACTTTTGGTGGAGACAAATTTTCTGGCTTGGTTCTGCAAACCAAATGGGATACTTAAAAATCTGTGTCACAGATGCAAGCGGCACTTTTTTGTATGGTGTCGAAACTTTTAAACGTTACAATGGTTTAGACTGTGAATATAATTTTCTAGCTGGTGACGGCAAGGGAGGTTTCCGTATTGTCGACAGGAAGCATTTTTTAGGAACACACATCGAGCAGCACAACCCATTTAATGAACCTAGGGGATGGTCAGATATCCAAAGGTTTGATGATGTAGTTCAATACTACTGGTGGGGTTCATACCCAAGATATTCTATCCCTGAAATCAAGGGAAAAAGATCAGATAAAATCCATGTTATCTTTGGAAGGGTTGGTAATTATCCATCTGTAACCCACATGTATCTTGATGATTTCTTTTACCGAAAAGACTACGTCTTAGGTGTCAGGGATATCCCTAATAGATACCGTGCTGGTGGGAAAGTGGTAATAGATAGTGAAACTGATACCGTCACTGTAGATAATATTCCAAAGATTGTCGATGTTGTGCAAGGCTCTGACTTCCTCACAATTCCCCCTGGTAAGTCACAGTTAGAAGTCTATTGCTCGAGTTGGGTAACAACTAAACCATCCGTATCTGTTAAATTTGAGGAGAGGTATCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a3e04f30ec483d8f898c1700c419dbd7b09c524c09fc2618b2bfbb23f60fb1ad
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8701
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of virulent Streptococcus thermophilus bacteriophages isolated in Uruguay Achigar,R., Campot,M.P., Tremblay,D., Labrie,S., Pianzzola,M.J. and Moineau,S. 2017-03-06 — GenBank