Protein

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Genbank accession
UPU15991.1 [GenBank]
Protein name
putative tip attachment protein J
RBP type
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MALIIHYTRNENGGFNTAQCYAEPMVFVTMRIPDGVPFTIYRDSVGEDNNVTEDFDALRQPGTFHIIEGAGGGVVSGAFKLLGAVLSPIMKLLTPSTAAAQTFSNVQGESPNNSLTDRNNKPRPYERVYDICGTVQSIPNNLMTTYNVFNAAGRTIEYGYYCVGRGLLNIQAADVTDGDTVLQNIPGSSAYIYGPNTSPNSGSPQLAIGDPIDQGLYITVSSNEIDGQTLKAPNDLSSRMTDGATAVYSGGLGIITDPSGGADFTAYIKVGDSVVFKNVFVDGVADLNANYVVTDISTVSITVDPSPKLSQWVNVGGTPQPLKISDNPTIEPYDAKEASFTPWTSITRINPERLLINVSAPNGMYLDWGAGKLFLGTVFEAEYQLLDDNDNPYGPVYAQQATVSGRSGDEVGTTLYAVLPTASKVRVRVRRVTPFQFDYDGVVVDELKYNDLFAQIADTTPHYGNITTVHTARLQTARATAVKQPQLKIVCTEMVQKYLGAGQFESFYTPNTQAVQSLIRLLLDPVVGGLDLSTANMDKLIATQFEIEDYFNDARAGQFCYTFDTYATTAQDIIEAIAEAIFCRAYREGKNILLDFDRPRQGPEMVFTHRSKVPGQEKWTRSFNDQGSFDSVKFSYIDPDTNTKETITIPEDGGLKTDTYDSKGVRNYQQAYWLAHRRYQMTRLKRVSVEFSSTEEGAFVRPGRAISVVKGSRVAPYDGYVIAADGLTLTLSQPVAFVSGDPHSLILKRRDGSVQSVPVAPGTTDRKVVMLAAPTEAVYTGNSALKTEFSFGSDSRHAAQMILVQTVTPNDDRTVKITGFNYDPAYYLRDGVPPFGRAFSDGFDSGFS
Physico‐chemical
properties
protein length:848 AA
molecular weight: 92557,48240 Da
isoelectric point:4,91535
aromaticity:0,10024
hydropathy:-0,24634

Domains

Domains [InterPro]
DC_0118
STR
1–681
DC_0118 DC_0808
NF040662
Unmapped
352–827
NF040662
UPU15991.1
1 848
Architecture
STR
RBD
STR 1-681 | RBD 698-842 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPU15991.1
1 848
Domain Start End Length (AA) Confidence
N-terminal 1 233 233 0,9944
Central domain 234 432 200 0,2400
C-terminal 433 848 415 0,0474
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-233
Central
234-432
C-terminal
433-848

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaM-Otaku
[NCBI] 		2932867 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPU15991.1 [NCBI]
Genbank nucleotide accession
ON087563 [NCBI]
CDS location
range 1473 -> 4019
strand -
CDS
TTGGCGCTAATAATTCACTACACCCGCAACGAAAACGGCGGTTTTAATACCGCGCAATGCTACGCTGAGCCTATGGTGTTCGTAACCATGCGCATACCGGACGGGGTGCCGTTCACCATTTACCGCGACTCGGTAGGCGAAGACAATAACGTTACCGAGGATTTCGACGCACTGCGCCAGCCGGGCACGTTCCACATTATCGAGGGCGCCGGCGGTGGCGTAGTCAGCGGTGCGTTTAAATTGCTCGGTGCCGTATTAAGCCCGATCATGAAACTGCTAACCCCATCAACGGCAGCCGCACAGACGTTTTCGAACGTGCAGGGTGAAAGCCCGAATAACAGCCTTACCGATCGCAACAACAAACCGCGCCCATATGAGCGCGTTTACGACATTTGCGGCACGGTTCAGAGTATTCCGAATAACCTAATGACCACCTATAACGTGTTCAACGCTGCAGGCAGAACGATCGAATACGGCTATTACTGCGTCGGCCGTGGTCTGCTAAATATTCAGGCCGCCGATGTTACCGACGGCGATACAGTGCTGCAGAATATCCCGGGGTCTTCTGCGTACATTTACGGCCCGAACACTTCACCGAACAGCGGATCGCCTCAGCTGGCGATCGGCGACCCTATTGACCAGGGGCTTTACATCACAGTATCGTCTAACGAGATTGACGGGCAGACGCTAAAAGCCCCGAACGACCTTTCGTCGCGAATGACCGACGGCGCAACGGCAGTATATTCTGGCGGCCTGGGCATTATCACTGACCCTTCCGGCGGAGCGGACTTCACGGCCTACATCAAGGTGGGCGATAGTGTGGTGTTCAAAAACGTGTTTGTCGATGGCGTGGCTGACCTCAATGCCAACTATGTCGTTACCGACATCAGCACCGTATCGATCACTGTCGACCCATCGCCGAAGTTGTCGCAATGGGTTAACGTTGGCGGCACTCCGCAGCCGTTGAAGATTTCCGACAACCCGACGATCGAGCCGTATGACGCCAAAGAAGCGTCGTTCACCCCGTGGACGTCGATTACCCGCATAAACCCCGAACGTCTGCTGATCAACGTCAGCGCCCCTAACGGCATGTATCTAGATTGGGGCGCCGGCAAATTGTTCCTTGGAACCGTATTTGAAGCGGAATATCAGCTACTGGACGATAACGATAACCCTTATGGACCGGTGTACGCGCAGCAGGCCACCGTGTCGGGGCGATCGGGAGACGAGGTAGGCACAACCCTGTATGCCGTGCTGCCGACAGCCAGCAAGGTGCGCGTGCGCGTGCGGCGCGTTACCCCCTTCCAATTCGATTACGATGGCGTGGTGGTGGACGAGCTGAAGTATAACGACCTGTTCGCGCAGATCGCCGACACAACGCCGCATTACGGCAACATTACCACCGTGCACACTGCGAGACTGCAGACCGCCCGAGCCACCGCCGTCAAGCAGCCGCAGCTTAAAATCGTGTGCACTGAAATGGTTCAAAAATACCTCGGCGCCGGCCAATTTGAATCGTTCTACACCCCGAACACGCAGGCCGTGCAGTCTCTGATTAGACTATTGCTAGACCCGGTTGTGGGCGGGCTTGACCTTTCCACGGCCAATATGGACAAACTGATCGCCACGCAATTCGAAATTGAGGACTATTTTAACGACGCGCGCGCAGGGCAATTCTGCTACACCTTCGACACCTACGCCACGACGGCGCAAGACATTATTGAAGCGATCGCCGAGGCGATATTCTGCCGCGCGTACCGGGAGGGTAAAAACATCCTGCTGGACTTTGACCGCCCGCGACAGGGCCCTGAAATGGTGTTCACGCATCGCAGCAAGGTTCCTGGGCAGGAAAAGTGGACGCGTTCGTTTAACGATCAGGGCAGTTTCGACAGCGTGAAGTTCAGCTATATCGACCCGGACACGAACACCAAAGAGACGATCACCATACCGGAAGACGGGGGTCTTAAAACCGACACCTACGATTCCAAAGGCGTGCGCAACTACCAGCAAGCGTATTGGCTAGCACACCGCCGCTACCAAATGACTCGGCTAAAACGCGTATCGGTTGAATTCTCCTCCACCGAGGAAGGGGCATTCGTCCGGCCGGGTCGCGCGATCAGCGTCGTAAAAGGATCGCGCGTGGCACCGTATGACGGCTATGTTATCGCTGCCGACGGTTTGACGTTAACATTGTCGCAGCCGGTCGCGTTCGTCTCTGGGGATCCGCACTCCCTGATCCTTAAGCGGCGTGACGGCAGCGTGCAGAGCGTCCCCGTAGCGCCAGGCACTACTGACCGCAAAGTAGTCATGCTGGCCGCGCCAACCGAGGCCGTGTATACTGGCAACAGCGCGCTGAAAACAGAATTCTCCTTCGGTAGCGATAGCCGCCATGCGGCGCAGATGATTTTAGTGCAGACGGTGACACCTAACGACGATCGCACCGTTAAAATAACCGGGTTCAACTACGACCCCGCCTACTACCTGCGCGACGGCGTCCCGCCATTCGGGCGAGCGTTTAGCGACGGGTTCGATTCCGGTTTTTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4abc12d4b029041984dcf7018d03e8562d3ddf3c6d20690856713b9ae828f4f2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2979
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50